Lus10027787.g (Linum usitatissimum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Lus10027787.g T334573_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10027787 Sox 56 86
Lus10027787 Sox 82 110

Links

Other Sox family TFs
Other Linum usitatissimum TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_06410 Ancylostoma caninum ANCCAN_06410 N 0.000
ANCCEY_10735 Ancylostoma ceylanicum ANCCEY_10735 N 0.000
ANCDUO_14679 Ancylostoma duodenale ANCDUO_14679 N 0.000
CBG19687 Caenorhabditis briggsae CBG19687 N 0.000
CBN07460 Caenorhabditis brenneri CBN07460 N 0.000
CJA02893 Caenorhabditis japonica CJA02893 N 0.000
CRE03166 Caenorhabditis remanei CRE03166 N 0.000
DICVIV_11664 Dictyocaulus viviparus DICVIV_11664 N 0.000
genemark-nMf.1.1.scaf00604-processed-gene-0.10 Meloidogyne floridensis genemark-nMf.1.1.scaf00604-processed-gene-0.10 N 0.000
GPLIN_000355200 Globodera pallida GPLIN_000355200 N 0.000
HCOI00506400 Haemonchus contortus HCOI00506400 N 0.000
HCOI00608900 Haemonchus contortus HCOI00608900 N 0.000
HPBE_0000407401 Heligmosomoides bakeri HPBE_0000407401 N 0.000
HPLM_0001001001 Haemonchus placei HPLM_0001001001 N 0.000
Minc00512 Meloidogyne incognita Minc00512 N 0.000
Minc02205 Meloidogyne incognita Minc02205 N 0.000
NBR_0001294901 Nippostrongylus brasiliensis NBR_0001294901 N 0.000
NECAME_16739 Necator americanus NECAME_16739 N 0.000
OESDEN_19099 Oesophagostomum dentatum OESDEN_19099 N 0.000
rps-13 Caenorhabditis elegans WBGene00004482 N 0.000
TELCIR_08212 Teladorsagia circumcincta TELCIR_08212 N 0.000
TELCIR_25960 Teladorsagia circumcincta TELCIR_25960 N 0.000