CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ASIM_0001132301
(
Anisakis simplex
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
ASIM_0001132301
T336043_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ASIM_0001132301-mRNA-1
Sox
25
62
IRRPMNAFMVWARMMRKQIATENPGMHNADLSKILGLE
ASIM_0001132301-mRNA-1
Sox
88
127
TVNVFEGKQWKGMSHVQKQPYVQEAESIRVKHLSAHPNYK
Links
Other
Sox
family TFs
Other
Anisakis simplex
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARB_07320
Arthroderma benhamiae
ARB_07320
N
0.488
ASIS002444
Anopheles sinensis
ASIS002444
N
0.631
BGIBMGA006156
Bombyx mori
BGIBMGA006156
N
0.520
CLEC004367
Cimex lectularius
CLEC004367
N
0.595
Cmyd_10007727
Chelonia mydas
Cmyd_10007727
N
0.456
fgenesh1_pg.C_scaffold_10000369
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_10000369
N
0.433
GH16346
Drosophila grimshawi
FBgn0123817
N
0.610
Hba_11463
Heterorhabditis bacteriophora
Hba_11463
N
0.428
HelroG178674
Helobdella robusta
HelroG178674
N
0.469
HPODL_02662
Ogataea parapolymorpha
HPODL_02662
N
0.418
JAAARDRAFT_460099
Jaapia argillacea
JAAARDRAFT_460099
N
0.463
KLLA0_B11495g
Kluyveromyces lactis
KLLA0_B11495g
N
0.435
LCUP017801
Lucilia cuprina
LCUP017801
N
0.609
M407DRAFT_45069
Tulasnella calospora
M407DRAFT_45069
N
0.457
MCOS_0000664501
Mesocestoides corti
MCOS_0000664501
N
0.427
PAS_chr3_1149
Komagataella pastoris
PAS_chr3_1149
N
0.416
RHTO_04537
Rhodosporidium toruloides
RHTO_04537
N
0.422
SAKL0C03872g
Lachancea kluyveri
SAKL0C03872g
N
0.438
SAKL0C03916g
Lachancea kluyveri
SAKL0C03916g
N
0.438
SAKL0D09922g
Lachancea kluyveri
SAKL0D09922g
N
0.441
SINV25043
Solenopsis invicta
SINV25043
N
0.530
sr12520
Sporisorium reilianum
sr12520
N
0.418
TRV_02051
Trichophyton verrucosum
TRV_02051
N
0.492
TSTA_110260
Talaromyces stipitatus
TSTA_110260
N
0.475
XP_002492281.1
Pichia pastoris
XP_002492281.1
N
0.416