snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 (Meloidogyne floridensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 T336978_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
snap_masked-nMf.1.1.scaf27159-processed-gene-0.2-mRNA-1 Sox 20 88

Links

Other Sox family TFs
Other Meloidogyne floridensis TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL010903 Aedes aegypti AAEL010903 N 0.450
AAH41216 Xenopus laevis AAH41216 N 0.462
AC123471.1 Rattus norvegicus ENSRNOG00000018377 N 0.452
ACAC_0000207501 Angiostrongylus cantonensis ACAC_0000207501 N 0.548
ACEP21543 Atta cephalotes ACEP21543 N 0.461
ACYPI008028 Acyrthosiphon pisum ACYPI008028 N 0.450
ALUE_0000987201 Ascaris lumbricoides ALUE_0000987201 N 0.477
ANCCAN_03785 Ancylostoma caninum ANCCAN_03785 N 0.554
ANCCAN_09575 Ancylostoma caninum ANCCAN_09575 N 0.554
ANCCEY_02937 Ancylostoma ceylanicum ANCCEY_02937 N 0.554
ANCDUO_12071 Ancylostoma duodenale ANCDUO_12071 N 0.554
ASIM_0001578601 Anisakis simplex ASIM_0001578601 N 0.483
ASIM_0001639001 Anisakis simplex ASIM_0001639001 N 0.483
ASU_02248 Ascaris suum ASU_02248 N 0.477
A_05744 Schistosoma haematobium A_05744 N 0.435
Bm7076 Brugia malayi Bm7076 N 0.502
CapteG156119 Capitella teleta CapteG156119 N 0.485
CBG09815 Caenorhabditis briggsae CBG09815 N 0.521
CBN09141 Caenorhabditis brenneri CBN09141 N 0.483
Cflo_00654--XP_395543.3_APIME Camponotus floridanus Cflo_00654--XP_395543.3_APIME N 0.461
CLEC001104 Cimex lectularius CLEC001104 N 0.448
CLEC009203 Cimex lectularius CLEC009203 N 0.448
CPIJ007400 Culex quinquefasciatus CPIJ007400 N 0.450
CPIJ018416 Culex quinquefasciatus CPIJ018416 N 0.450
CpipJ_CPIJ007400 Culex pipiens CpipJ_CPIJ007400 N 0.450
CpipJ_CPIJ018416 Culex pipiens CpipJ_CPIJ018416 N 0.450
CRE25200 Caenorhabditis remanei CRE25200 N 0.483
csin103376 Clonorchis sinensis csin103376 N 0.430
D915_15883 Fasciola hepatica D915_15883 N 0.437
DAPPUDRAFT_305068 Daphnia pulex DAPPUDRAFT_305068 N 0.461
DME_0000063901 Dracunculus medinensis DME_0000063901 N 0.509
ECANG7_05376 Echinococcus canadensis ECANG7_05376 N 0.438
EEL_0000522201 Elaeophora elaphi EEL_0000522201 N 0.502
EmuJ_000113200 Echinococcus multilocularis EmuJ_000113200 N 0.438
ENSCING00000007774 Ciona intestinalis ENSCING00000007774 N 0.437
ENSCJAG00000006608 Callithrix jacchus ENSCJAG00000006608 N 0.455
ENSFCAG00000026463 Felis catus ENSFCAG00000026463 N 0.423
ENSGMOG00000002045 Gadus morhua ENSGMOG00000002045 N 0.454
ENSOCUG00000016848 Oryctolagus cuniculus ENSOCUG00000016848 N 0.456
ENSONIG00000006293 Oreochromis niloticus ENSONIG00000006293 N 0.454
ENSPFOG00000009890 Poecilia formosa ENSPFOG00000009890 N 0.454
ENSPFOG00000019561 Poecilia formosa ENSPFOG00000019561 N 0.454
ENSXMAG00000002642 Xiphophorus maculatus ENSXMAG00000002642 N 0.454
EVEC_0000378901 Enterobius vermicularis EVEC_0000378901 N 0.523
GA26137 Drosophila pseudoobscura FBgn0247513 N 0.427
GB50847 Apis mellifera GB50847 N 0.461
GL26801 Drosophila persimilis FBgn0164382 N 0.427
GPLIN_000239300 Globodera pallida GPLIN_000239300 N 0.554
Hba_20635 Heterorhabditis bacteriophora Hba_20635 N 0.455
HCOI00022200 Haemonchus contortus HCOI00022200 N 0.554
HCOI00569400 Haemonchus contortus HCOI00569400 N 0.554
HDID_0000207001 Hymenolepis diminuta HDID_0000207001 N 0.446
HelroG188630 Helobdella robusta HelroG188630 N 0.456
HHAL002088-PA Halyomorpha halys HHAL002088-PA N 0.461
HHAL007378-PA Halyomorpha halys HHAL007378-PA N 0.437
HMEL010720 Heliconius melpomene HMEL010720 N 0.440
HPBE_0000083501 Heligmosomoides bakeri HPBE_0000083501 N 0.554
HPLM_0001658301 Haemonchus placei HPLM_0001658301 N 0.554
Hsal_01302--XP_395543.3_APIME Harpegnathos saltator Hsal_01302--XP_395543.3_APIME N 0.461
ISCW021016 Ixodes scapularis ISCW021016 N 0.459
KGM_12870 Danaus plexippus KGM_12870 N 0.440
L596_g22461 Steinernema carpocapsae L596_g22461 N 0.419
L798_00593 Zootermopsis nevadensis L798_00593 N 0.461
L892_g30100 Steinernema scapterisci L892_g30100 N 0.419
L898_g375 Steinernema monticolum L898_g375 N 0.420
LCUP013669 Lucilia cuprina LCUP013669 N 0.422
LDEC003494 Leptinotarsa decemlineata LDEC003494 N 0.461
LLOJ006040 Lutzomyia longipalpis LLOJ006040 N 0.462
LOAG_01279 Loa loa LOAG_01279 N 0.502
LotgiG111061 Lottia gigantea LotgiG111061 N 0.458
maker-nMf.1.1.scaf01126-augustus-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf01126-augustus-gene-0.13 N 0.741
MCOS_0000928101 Mesocestoides corti MCOS_0000928101 N 0.452
MhA1_Contig1809.frz3.gene8 Meloidogyne hapla MhA1_Contig1809.frz3.gene8 N 0.660
Minc14081 Meloidogyne incognita Minc14081 N 0.741
nAv.1.0.1.g03900 Acanthocheilonema viteae nAv.1.0.1.g03900 N 0.502
nDi.2.2.2.g02092 Dirofilaria immitis nDi.2.2.2.g02092 N 0.502
NECAME_16117 Necator americanus NECAME_16117 N 0.554
NEMVEDRAFT_v1g177453 Nematostella vectensis NEMVEDRAFT_v1g177453 N 0.474
nLs.2.1.2.g01047 Litomosoides sigmodontis nLs.2.1.2.g01047 N 0.502
nOo.2.0.1.g01360 Onchocerca ochengi nOo.2.0.1.g01360 N 0.502
NV11999 Nasonia vitripennis NV11999 N 0.463
OESDEN_12607 Oesophagostomum dentatum OESDEN_12607 N 0.554
OESDEN_21929 Oesophagostomum dentatum OESDEN_21929 N 0.554
OFLC_0001285101 Onchocerca flexuosa OFLC_0001285101 N 0.502
PPA02543 Pristionchus pacificus PPA02543 N 0.442
PPAI002058 Phlebotomus papatasi PPAI002058 N 0.454
PXEA_0001727801 Protopolystoma xenopodis PXEA_0001727801 N 0.444
Sakowv30017721m.g Saccoglossus kowalevskii Sakowv30017721m.g N 0.475
scaffold237-EXSNAP2012.36 Pristionchus exspectatus scaffold237-EXSNAP2012.36 N 0.442
SCUD_0000923501 Schistosoma curassoni SCUD_0000923501 N 0.435
Sjc_0000110 Schistosoma japonicum Sjc_0000110 N 0.435
SMAR004982 Strigamia maritima SMAR004982 N 0.441
SMARCE1 Gasterosteus aculeatus ENSGACG00000018114 N 0.450
smarce1 Oryzias latipes ENSORLG00000018629 N 0.454
smarce1 Tetraodon nigroviridis ENSTNIG00000014009 N 0.454
smarce1 Takifugu rubripes ENSTRUG00000012899 N 0.454
Smp_154640 Schistosoma mansoni Smp_154640 N 0.435
SMTD_0000014601 Schistosoma mattheei SMTD_0000014601 N 0.435
SMU15005679 Schmidtea mediterranea SMU15005679 N 0.436
SMUV_0000644601 Syphacia muris SMUV_0000644601 N 0.477
SPU_009282 Strongylocentrotus purpuratus SPU_009282 N 0.434
SROB_0000607501 Schistosoma rodhaini SROB_0000607501 N 0.435
SSLN_0001888901 Schistocephalus solidus SSLN_0001888901 N 0.442
SVUK_0000819801 Strongylus vulgaris SVUK_0000819801 N 0.554
swsn-3 Caenorhabditis elegans WBGene00022182 N 0.528
T265_02983 Opisthorchis viverrini T265_02983 N 0.437
TASK_0000875901 Taenia asiatica TASK_0000875901 N 0.438
TC007745 Tribolium castaneum TC007745 N 0.461
TCLT_0000145301 Thelazia callipaeda TCLT_0000145301 N 0.502
TELCIR_14354 Teladorsagia circumcincta TELCIR_14354 N 0.554
TriadG53566 Trichoplax adhaerens TriadG53566 N 0.427
TsM_000047400 Taenia solium TsM_000047400 N 0.438
WBGene00245293 Onchocerca volvulus WBGene00245293 N 0.502
WUBG_07283 Wuchereria bancrofti WUBG_07283 N 0.502
YQE_02381 Dendroctonus ponderosae YQE_02381 N 0.461