Solyc08g080150.1 (Solanum lycopersicum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Solyc08g080150.1 T344424_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VIT_15s0048g01150
M02515_2.00 		Vitis vinifera
NNGGNCCCAC
GTGGGNCCNN		 PBM
Weirauch et al.(2014)
pTH9294 		0.962 0.608
TCP9
M01086_2.00 		Arabidopsis thaliana
NNGGGCCCACN
NGTGGGCCCNN		 PBM
Sullivan et al.(2014)
pTH9796 		0.958 0.608
TCP9
M07281_2.00 		Arabidopsis thaliana
RTGGGDCCCAC
GTGGGHCCCAY		 Dap-seq
OMalley et al.(2016)
At2g45680_colamp_a 		0.958 0.608
TCP9
M07282_2.00 		Arabidopsis thaliana
DGTGGGRCCCACDDNDNDNBN
NVNHNHNHHGTGGGYCCCACH		 Dap-seq
OMalley et al.(2016)
At2g45680_col_b 		0.958 0.608
LjSGA_053525.1
M02518_2.00 		Lotus japonicus
GGNCCCAC
GTGGGNCC		 PBM
Weirauch et al.(2014)
pTH9201 		0.955 0.560
PK14653.1
M01317_2.00 		Cannabis sativa
BGGSCCCAC
GTGGGSCCV		 PBM
Lambert et al.(2019)
pTH11324 		0.954 0.568
PK14653.1
M02517_2.00 		Cannabis sativa
BTGGGCCCAV
BTGGGCCCAV		 PBM
Weirauch et al.(2014)
pTH9586 		0.954 0.568
TCP15
M00892_2.00 		Arabidopsis thaliana
NNGGNCCCAC
GTGGGNCCNN		 PBM
Franco-Zorrilla et al.(2014)
TCP15 		0.952 0.504
TCP15
M07277_2.00 		Arabidopsis thaliana
RTRGGDCCCACHH
DDGTGGGHCCYAY		 Dap-seq
OMalley et al.(2016)
At1g69690_col_a 		0.952 0.504
TCP15
M07278_2.00 		Arabidopsis thaliana
RTRGGNCCCACHW
WDGTGGGNCCYAY		 Dap-seq
OMalley et al.(2016)
At1g69690_colamp_a 		0.952 0.504
TCP15
M11394_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TCP15_01 		0.952 0.504
PCF2
M11399_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF2_01 		0.950 0.496
GLYMA19G26560
M02511_2.00 		Glycine max
BGGBCCCAC
GTGGGVCCV		 PBM
Weirauch et al.(2014)
pTH9184 		0.950 0.504
TCP19
M02504_2.00 		Arabidopsis thaliana
NNGGVCCCAC
GTGGGBCCNN		 PBM
Weirauch et al.(2014)
pTH7452 		0.950 0.568
PK13314.1
M01316_2.00 		Cannabis sativa
NNGGNCCCAC
GTGGGNCCNN		 PBM
Lambert et al.(2019)
pTH11330 		0.949 0.472
fgenesh2_kg.8__1074__AT5G51910.2
M02509_2.00 		Arabidopsis lyrata
GRSCCCAC
GTGGGSYC		 PBM
Weirauch et al.(2014)
pTH9232 		0.946 0.568
TCP20
M02502_2.00 		Arabidopsis thaliana
GGSCCCACNN
NNGTGGGSCC		 PBM
Weirauch et al.(2014)
pTH8159 		0.946 0.456
TCP20
M07285_2.00 		Arabidopsis thaliana
NNNNNNNNNNGTGGGRCCCAC
GTGGGYCCCACNNNNNNNNNN		 Dap-seq
OMalley et al.(2016)
TCP20_col_a 		0.946 0.456
TCP20
M07286_2.00 		Arabidopsis thaliana
RTGGGDCCCACH
DGTGGGHCCCAY		 Dap-seq
OMalley et al.(2016)
TCP20_colamp_a 		0.946 0.456
TCP20
M11397_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TCP20_01 		0.946 0.456
PK12736.1
M01315_2.00 		Cannabis sativa
NRRSCMYAYNNNNN
NNNNNRTRKGSYYN		 PBM
Lambert et al.(2019)
pTH10121 		0.945 0.472
AT-TCP20
M02507_2.00 		Arabidopsis lyrata
GRSCCCAC
GTGGGSYC		 PBM
Weirauch et al.(2014)
pTH9229 		0.945 0.448
TCP14
M07289_2.00 		Arabidopsis thaliana
AVADAKVDBGTGGGDCCCAC
GTGGGHCCCACVHBMTHTBT		 Dap-seq
OMalley et al.(2016)
TCP14_col_b 		0.943 0.480
cassava45561.m1
M02516_2.00 		Manihot esculenta
KGGVCCCACH
DGTGGGBCCM		 PBM
Weirauch et al.(2014)
pTH9207 		0.938 0.448
TCP8
M01311_2.00 		Arabidopsis thaliana
NGGNMCCAC
GTGGKNCCN		 PBM
Lambert et al.(2019)
pTH11569 		0.931 0.448
TCP22
M07279_2.00 		Arabidopsis thaliana
RTRGGNCCCACHN
NDGTGGGNCCYAY		 Dap-seq
OMalley et al.(2016)
At1g72010_colamp_a 		0.927 0.440
TCP22
M07280_2.00 		Arabidopsis thaliana
RTGGGDCCCACNN
NNGTGGGHCCCAY		 Dap-seq
OMalley et al.(2016)
At1g72010_col 		0.927 0.440
TCP23
M00891_2.00 		Arabidopsis thaliana
NNGGKCCCAC
GTGGGMCCNN		 PBM
Franco-Zorrilla et al.(2014)
TCP23 		0.920 0.432
TCP21
M07292_2.00 		Arabidopsis thaliana
NNRTGGGDCCCACN
NGTGGGHCCCAYNN		 Dap-seq
OMalley et al.(2016)
At5g08330_col_a 		0.910 0.416
TCP21
M07293_2.00 		Arabidopsis thaliana
RTRGGDCCCACH
DGTGGGHCCYAY		 Dap-seq
OMalley et al.(2016)
At5g08330_colamp_a 		0.910 0.416
TCP7
M07294_2.00 		Arabidopsis thaliana
RTGGGNCCCAC
GTGGGNCCCAY		 Dap-seq
OMalley et al.(2016)
TCP7_col_a 		0.909 0.416
OS02G0635800
M02512_2.00 		Oryza sativa
NBGGGCCCVN
NBGGGCCCVN		 PBM
Weirauch et al.(2014)
pTH8856 		0.905 0.408
OsI_08196
M02513_2.00 		Oryza sativa
GGGCCCAC
GTGGGCCC		 PBM
Weirauch et al.(2014)
pTH9274 		0.905 0.400
TCP11
M11395_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TCP11_01 		0.850 0.360
TCP11
M11396_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TCP11_02 		0.850 0.360
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc08g080150.1.1 TCP 74 198

Links

Other TCP family TFs
Other Solanum lycopersicum TFs

645 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29682.m000576 Ricinus communis 29682.m000576 I
30162.m001290 Ricinus communis 30162.m001290 I
30170.m013806 Ricinus communis 30170.m013806 I
AMTR_s00022p00128600 Amborella trichopoda AMTR_s00022p00128600 I
Aquca_007_00955 Aquilegia coerulea Aquca_007_00955 I
ARID3 Arabidopsis thaliana AT2G17410 D
ARID6 Arabidopsis thaliana AT1G20910 D
AT1G76510 Arabidopsis thaliana AT1G76510 I
BGIOSGA005739 Oryza indica BGIOSGA005739 I
BGIOSGA023283 Oryza indica BGIOSGA023283 I
Bo5g030830 Brassica oleracea Bo5g030830 I
Bo6g120610 Brassica oleracea Bo6g120610 I
Bo7g014510 Brassica oleracea Bo7g014510 I
Bo7g061260 Brassica oleracea Bo7g061260 I
Bo8g070520 Brassica oleracea Bo8g070520 I
Bo9g024490 Brassica oleracea Bo9g024490 I
Bostr.18351s0201 Boechera stricta Bostr.18351s0201 I
Bostr.20129s0090 Boechera stricta Bostr.20129s0090 I
Bostr.7128s0681 Boechera stricta Bostr.7128s0681 I
Bra002058 Brassica rapa Bra002058 I
Bra012257 Brassica rapa Bra012257 I
Bra016443 Brassica rapa Bra016443 I
Bra025855 Brassica rapa Bra025855 I
Bra037275 Brassica rapa Bra037275 I
BRADI1G55550 Brachypodium distachyon BRADI1G55550 I
BRADI3G53270 Brachypodium distachyon BRADI3G53270 I
Cagra.2281s0033 Capsella grandiflora Cagra.2281s0033 I
Cagra.6160s0006 Capsella grandiflora Cagra.6160s0006 I
Cagra.6788s0003 Capsella grandiflora Cagra.6788s0003 I
Carubv10009301m.g Capsella rubella Carubv10009301m.g I
Carubv10012979m.g Capsella rubella Carubv10012979m.g I
Carubv10020299m.g Capsella rubella Carubv10020299m.g I
cassava10018.m1 Manihot esculenta cassava10018.m1 I
cassava23401.valid.m1 Manihot esculenta cassava23401.valid.m1 I
cassava24840.valid.m1 Manihot esculenta cassava24840.valid.m1 I
cassava27165.m1 Manihot esculenta cassava27165.m1 I
Ca_04797 Cicer arietinum Ca_04797 I
Ca_10698 Cicer arietinum Ca_10698 I
chr1.CM0150.370.nc Lotus japonicus chr1.CM0150.370.nc I
Ciclev10001099m.g Citrus clementina Ciclev10001099m.g I
Ciclev10025351m.g Citrus clementina Ciclev10025351m.g I
Ciclev10030351m.g Citrus clementina Ciclev10030351m.g I
Cla009111 Citrullus lanatus Cla009111 I
Cucsa.323280 Cucumis sativus Cucsa.323280 I
Eucgr.F01815 Eucalyptus grandis Eucgr.F01815 I
Eucgr.I01546 Eucalyptus grandis Eucgr.I01546 I
Eucgr.I02198 Eucalyptus grandis Eucgr.I02198 I
evm.TU.supercontig_26.2 Carica papaya evm.TU.supercontig_26.2 I
e_gw1.66.61.1 Physcomitrella patens e_gw1.66.61.1 I
F775_06069 Aegilops tauschii F775_06069 I
fgenesh2_kg.1__2281__AT1G20910.1 Arabidopsis lyrata fgenesh2_kg.1__2281__AT1G20910.1 I
fgenesh2_kg.2__1939__AT1G76510.1 Arabidopsis lyrata fgenesh2_kg.2__1939__AT1G76510.1 I
fgenesh2_kg.3__3325__AT2G17410.1 Arabidopsis lyrata fgenesh2_kg.3__3325__AT2G17410.1 I
gene12982-v1.0-hybrid Fragaria vesca gene12982-v1.0-hybrid I
gene17116-v1.0-hybrid Fragaria vesca gene17116-v1.0-hybrid I
GLYMA01G36040 Glycine max GLYMA01G36040 I
GLYMA04G01560 Glycine max GLYMA04G01560 I
GLYMA05G10756 Glycine max GLYMA05G10756 I
GLYMA06G01640 Glycine max GLYMA06G01640 I
GLYMA09G32820 Glycine max GLYMA09G32820 I
GLYMA11G09370 Glycine max GLYMA11G09370 I
GLYMA16G21840 Glycine max GLYMA16G21840 I
Gorai.002G112400 Gossypium raimondii Gorai.002G112400 I
Gorai.003G000800 Gossypium raimondii Gorai.003G000800 I
Gorai.012G137700 Gossypium raimondii Gorai.012G137700 I
GRMZM2G110109 Zea mays GRMZM2G110109 I
GRMZM2G180654 Zea mays GRMZM2G180654 I
GRMZM2G421899 Zea mays GRMZM2G421899 I
GRMZM5G883993 Zea mays GRMZM5G883993 I
GSMUA_Achr3G11660_001 Musa acuminata GSMUA_Achr3G11660_001 I
GSMUA_Achr4G19240_001 Musa acuminata GSMUA_Achr4G19240_001 I
GSMUA_AchrUn_randomG12940_001 Musa acuminata GSMUA_AchrUn_randomG12940_001 I
gw1.131.40.1 Physcomitrella patens gw1.131.40.1 I
LPERR02G24480 Leersia perrieri LPERR02G24480 I
LPERR06G17780 Leersia perrieri LPERR06G17780 I
Lus10001618.g Linum usitatissimum Lus10001618.g I
Lus10016045.g Linum usitatissimum Lus10016045.g I
Lus10022981.g Linum usitatissimum Lus10022981.g I
MDP0000188323 Malus domestica MDP0000188323 I
MDP0000834789 Malus domestica MDP0000834789 I
MDP0000890776 Malus domestica MDP0000890776 I
mg023226m Mimulus guttatus mg023226m I
mgf001698m Mimulus guttatus mgf001698m I
mgf002691m Mimulus guttatus mgf002691m I
mgf005009m Mimulus guttatus mgf005009m I
mgf014392m Mimulus guttatus mgf014392m I
MTR_3g116200 Medicago truncatula MTR_3g116200 I
MTR_5g024920 Medicago truncatula MTR_5g024920 I
OB02G37240 Oryza brachyantha OB02G37240 I
OBART02G30070 Oryza barthii OBART02G30070 I
OBART06G21220 Oryza barthii OBART06G21220 I
OGLUM02G30740 Oryza glumaepatula OGLUM02G30740 I
OGLUM06G22430 Oryza glumaepatula OGLUM06G22430 I
OLONG_022248 Oryza longistaminata OLONG_022248 I
OMERI01G31330 Oryza meridionalis OMERI01G31330 I
OMERI02G28920 Oryza meridionalis OMERI02G28920 I
ONIVA02G32840 Oryza nivara ONIVA02G32840 I
ONIVA06G25180 Oryza nivara ONIVA06G25180 I
OPUNC02G27630 Oryza punctata OPUNC02G27630 I
OPUNC06G19340 Oryza punctata OPUNC06G19340 I
orange1.1g004663m.g Citrus sinensis orange1.1g004663m.g I
orange1.1g009744m.g Citrus sinensis orange1.1g009744m.g I
orange1.1g012780m.g Citrus sinensis orange1.1g012780m.g I
ORGLA02G0256100 Oryza glaberrima ORGLA02G0256100 I
ORUFI02G31730 Oryza rufipogon ORUFI02G31730 I
ORUFI06G22870 Oryza rufipogon ORUFI06G22870 I
OS02G0714300 Oryza sativa OS02G0714300 I
OS06G0622300 Oryza sativa OS06G0622300 I
Pavir.Aa00633 Panicum virgatum Pavir.Aa00633 I
Pavir.Ab03084 Panicum virgatum Pavir.Ab03084 I
Pavir.Db00824 Panicum virgatum Pavir.Db00824 I
PDK_20s1315201g001 Phoenix dactylifera PDK_20s1315201g001 I
PDK_20s1326081g004 Phoenix dactylifera PDK_20s1326081g004 I
PGSC0003DMG400010001 Solanum tuberosum PGSC0003DMG400010001 I
PGSC0003DMG400021771 Solanum tuberosum PGSC0003DMG400021771 I
PK02181.1 Cannabis sativa PK02181.1 I
PK12537.1 Cannabis sativa PK12537.1 I
Pm020703 Prunus mume Pm020703 I
Pm022898 Prunus mume Pm022898 I
Pm026967 Prunus mume Pm026967 I
POPTR_0001s46070 Populus trichocarpa POPTR_0001s46070 I
POPTR_0002s00550 Populus trichocarpa POPTR_0002s00550 I
POPTR_0004s21870 Populus trichocarpa POPTR_0004s21870 I
POPTR_0011s14850 Populus trichocarpa POPTR_0011s14850 I
PRUPE_ppa001071mg Prunus persica PRUPE_ppa001071mg I
PRUPE_ppa003469mg Prunus persica PRUPE_ppa003469mg I
PRUPE_ppa006712mg Prunus persica PRUPE_ppa006712mg I
SapurV1A.0016s0160 Salix purpurea SapurV1A.0016s0160 I
SapurV1A.0047s0480 Salix purpurea SapurV1A.0047s0480 I
SapurV1A.0478s0090 Salix purpurea SapurV1A.0478s0090 I
SapurV1A.0554s0250 Salix purpurea SapurV1A.0554s0250 I
Sb04g029990 Sorghum bicolor Sb04g029990 I
Sb10g024400 Sorghum bicolor Sb10g024400 I
SELMODRAFT_271464 Selaginella moellendorffii SELMODRAFT_271464 I
SELMODRAFT_445202 Selaginella moellendorffii SELMODRAFT_445202 I
Si006372m.g Setaria italica Si006372m.g I
Si017073m.g Setaria italica Si017073m.g I
Solyc04g082820.2 Solanum lycopersicum Solyc04g082820.2 I
Solyc12g094730.1 Solanum lycopersicum Solyc12g094730.1 I
TCM_000019 Theobroma cacao TCM_000019 I
TCM_007605 Theobroma cacao TCM_007605 I
TCM_034809 Theobroma cacao TCM_034809 I
Thhalv10007750m.g Eutrema salsugineum Thhalv10007750m.g I
Thhalv10018578m.g Eutrema salsugineum Thhalv10018578m.g I
Thhalv10022553m.g Eutrema salsugineum Thhalv10022553m.g I
Traes_2AS_49D6010DA1 Triticum aestivum Traes_2AS_49D6010DA1 I
Traes_2BS_B3411790F Triticum aestivum Traes_2BS_B3411790F I
Traes_2DL_C465ACBE4 Triticum aestivum Traes_2DL_C465ACBE4 I
Traes_6AL_D304A3C3B Triticum aestivum Traes_6AL_D304A3C3B I
Traes_6BL_936B5B999 Triticum aestivum Traes_6BL_936B5B999 I
Traes_6DL_E6E385C31 Triticum aestivum Traes_6DL_E6E385C31 I
TRIUR3_34317 Triticum urartu TRIUR3_34317 I
VIT_04s0044g01840 Vitis vinifera VIT_04s0044g01840 I
VIT_18s0122g00560 Vitis vinifera VIT_18s0122g00560 I