Cla010832 (Citrullus lanatus)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03638 (TCR) IPR005172 Cla010832 T345906_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G20110
M02520_2.00 		Arabidopsis thaliana
DTTTAAAH
DTTTAAAH		 PBM
Weirauch et al.(2014)
pTH7914 		0.672 0.933
TCX5
M02523_2.00 		Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN		 PBM
Weirauch et al.(2014)
pTH8164 		0.672 0.933
AT2G20110
M07295_2.00 		Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_col_a 		0.672 0.933
AT2G20110
M07296_2.00 		Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a 		0.672 0.933
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00 		Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN		 PBM
Weirauch et al.(2014)
pTH9252 		0.672 0.840
AT5G25790
M01319_2.00 		Arabidopsis thaliana
NHYRAAHN
NDTTYRDN		 PBM
Lambert et al.(2019)
pTH11533 		0.672 0.827
lin54
M02526_2.00 		Danio rerio
NHTYRAAH
DTTYRADN		 PBM
Weirauch et al.(2014)
pTH8399 		0.672 0.680
NEMVEDRAFT_v1g111410
M01320_2.00 		Nematostella vectensis
NNNNYRWRN
NYWYRNNNN		 PBM
Lambert et al.(2019)
pTH9771 		0.672 0.680
SPU_025306
M02531_2.00 		Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN		 PBM
Weirauch et al.(2014)
pTH9286 		0.672 0.680
LIN54
M02527_2.00 		Gallus gallus
NRTTYAAAH
DTTTRAAYN		 PBM
Weirauch et al.(2014)
pTH8566 		0.672 0.667
XP_002124866.1
M01321_2.00 		Ciona intestinalis
NDTTYRAAN
NTTYRAAHN		 PBM
Lambert et al.(2019)
pTH9835 		0.672 0.667
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00 		Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN		 PBM
Weirauch et al.(2014)
pTH9457 		0.672 0.667
gw1.20.00.89.1
M02535_2.00 		Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW		 PBM
Weirauch et al.(2014)
pTH9647 		0.672 0.667
ENSTSYG00000005291
M02528_2.00 		Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN		 PBM
Weirauch et al.(2014)
pTH9366 		0.672 0.640
TCX3
M01087_2.00 		Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN		 PBM
Sullivan et al.(2014)
pTH7218 		0.672 0.627
TCX3
M02522_2.00 		Arabidopsis thaliana
WTTYAAAH
DTTTRAAW		 PBM
Weirauch et al.(2014)
pTH7421 		0.672 0.627
BGIBMGA008956
M02524_2.00 		Bombyx mori
AATTTAAAW
WTTTAAATT		 PBM
Weirauch et al.(2014)
pTH9238 		0.672 0.627
TCX3
M07297_2.00 		Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH		 Dap-seq
OMalley et al.(2016)
SOL1_colamp_a 		0.672 0.627
TCX3
M07298_2.00 		Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW		 Dap-seq
OMalley et al.(2016)
SOL1_col 		0.672 0.627
TCX2
M07300_2.00 		Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW		 Dap-seq
OMalley et al.(2016)
TCX2_col_a 		0.672 0.613
TCX2
M07301_2.00 		Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA		 Dap-seq
OMalley et al.(2016)
TCX2_colamp_a 		0.672 0.613
BRADI1G55710
M02525_2.00 		Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN		 PBM
Weirauch et al.(2014)
pTH9241 		0.672 0.600
GE12548
M02529_2.00 		Drosophila yakuba
DTTYAAAY
RTTTRAAH		 PBM
Weirauch et al.(2014)
pTH9262 		0.672 0.600
PK22848.1
M02532_2.00 		Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9724 		0.672 0.587
TSO1
M07299_2.00 		Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW		 Dap-seq
OMalley et al.(2016)
TSO1_col_a 		0.672 0.587
TCX4
M02521_2.00 		Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH		 PBM
Weirauch et al.(2014)
pTH7573 		0.672 0.573
GSPATT00010696001
M02530_2.00 		Paramecium tetraurelia
NNBRAAHN
NDTTYVNN		 PBM
Weirauch et al.(2014)
pTH8720 		0.672 0.560
PK27683.1
M01322_2.00 		Cannabis sativa
NDTTYAAAH
DTTTRAAHN		 PBM
Lambert et al.(2019)
pTH11347 		0.672 0.547
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla010832 TCR/CxC 123 159
Cla010832 TCR/CxC 208 245

Links

Other TCR/CxC family TFs
Other Citrullus lanatus TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAB34088 Xenopus laevis AAB34088 I
AAK54135 Xenopus tropicalis AAK54135 I
AAK54137 Xenopus laevis AAK54137 I
AAK54139 Xenopus laevis AAK54139 I
Aan_R012932 Calypte anna Aan_R012932 I
Afo_R005870 Aptenodytes forsteri Afo_R005870 I
Alligator_sinensis_CCG016283.1 Alligator sinensis Alligator_sinensis_CCG016283.1 I
BGIBMGA006230 Bombyx mori BGIBMGA006230 I
Brh_R006038 Buceros rhinoceros Brh_R006038 I
CapteG76255 Capitella teleta CapteG76255 I
CLEC007039 Cimex lectularius CLEC007039 I
ENSAMEG00000009606 Ailuropoda melanoleuca ENSAMEG00000009606 I
ENSAMXG00000011013 Astyanax mexicanus ENSAMXG00000011013 I
ENSAPLG00000003920 Anas platyrhynchos ENSAPLG00000003920 I
ENSCPOG00000014827 Cavia porcellus ENSCPOG00000014827 I
ENSCSAG00000014787 Chlorocebus sabaeus ENSCSAG00000014787 I
ENSFALG00000005762 Ficedula albicollis ENSFALG00000005762 I
ENSGALG00000015241 Gallus gallus ENSGALG00000015241 I
ENSGMOG00000002669 Gadus morhua ENSGMOG00000002669 I
ENSLACG00000004705 Latimeria chalumnae ENSLACG00000004705 I
ENSLACG00000005413 Latimeria chalumnae ENSLACG00000005413 I
ENSLOCG00000005992 Lepisosteus oculatus ENSLOCG00000005992 I
ENSMEUG00000009510 Macropus eugenii ENSMEUG00000009510 I
ENSMPUG00000010793 Mustela putorius furo ENSMPUG00000010793 I
ENSNLEG00000013421 Nomascus leucogenys ENSNLEG00000013421 I
ENSOARG00000013030 Ovis aries ENSOARG00000013030 I
ENSONIG00000009542 Oreochromis niloticus ENSONIG00000009542 I
ENSP00000020945-D1 Bos grunniens ENSP00000020945-D1 I
ENSP00000380034 Macaca fascicularis ENSP00000380034 I
ENSPANG00000017540 Papio anubis ENSPANG00000017540 I
ENSPFOG00000014336 Poecilia formosa ENSPFOG00000014336 I
ENSPPYG00000018578 Pongo abelii ENSPPYG00000018578 I
ENSPSIG00000016395 Pelodiscus sinensis ENSPSIG00000016395 I
ENSSHAG00000004205 Sarcophilus harrisii ENSSHAG00000004205 I
ENSSSCG00000024404 Sus scrofa ENSSSCG00000024404 I
ENSSSCG00000026570 Sus scrofa ENSSSCG00000026570 I
ENSSTOG00000028743 Ictidomys tridecemlineatus ENSSTOG00000028743 I
estExt_fgenesh2_kg.C_190001 Branchiostoma floridae estExt_fgenesh2_kg.C_190001 I
GA17994 Drosophila pseudoobscura FBgn0078003 I
GD21956 Drosophila simulans FBgn0193371 I
GE19402 Drosophila yakuba FBgn0236745 I
GF14525 Drosophila ananassae FBgn0091552 I
Gfo_R012649 Geospiza fortis Gfo_R012649 I
GG24207 Drosophila erecta FBgn0116339 I
GH13119 Drosophila grimshawi FBgn0120596 I
GH13754 Drosophila grimshawi FBgn0121230 I
GI17894 Drosophila mojavensis FBgn0140635 I
GI22651 Drosophila mojavensis FBgn0145379 I
GJ17399 Drosophila virilis FBgn0204571 I
GJ23203 Drosophila virilis FBgn0210305 I
GK18133 Drosophila willistoni FBgn0220132 I
GK18253 Drosophila willistoni FBgn0220252 I
GL26594 Drosophila persimilis FBgn0164176 I
GM14357 Drosophila sechellia FBgn0169282 I
HMEL002306 Heliconius melpomene HMEL002306 I
KGM_17970 Danaus plexippus KGM_17970 I
L798_10614 Zootermopsis nevadensis L798_10614 I
LCUP013268 Lucilia cuprina LCUP013268 I
LDEC001157 Leptinotarsa decemlineata LDEC001157 I
MCINX001355 Melitaea cinxia MCINX001355 I
MDOA014024 Musca domestica MDOA014024 I
Myotis_brandtii_Snai2_10018131 Myotis brandtii Myotis_brandtii_Snai2_10018131 I
NV17743 Nasonia vitripennis NV17743 I
Ogr04681 Ophisaurus gracilis Ogr04681 I
PHUM091060 Pediculus humanus PHUM091060 I
Pvit_15376 Pogona vitticeps Pvit_15376 I
RPRC005707 Rhodnius prolixus RPRC005707 I
SNAI2 Anolis carolinensis ENSACAG00000012332 I
SNAI2 Bos taurus ENSBTAG00000013227 I
SNAI2 Canis familiaris ENSCAFG00000006638 I
SNAI2 Choloepus hoffmanni ENSCHOG00000007046 I
SNAI2 Callithrix jacchus ENSCJAG00000013499 I
snai2 Danio rerio ENSDARG00000040046 I
SNAI2 Dasypus novemcinctus ENSDNOG00000035997 I
SNAI2 Equus caballus ENSECAG00000010120 I
SNAI2 Felis catus ENSFCAG00000015779 I
SNAI2 Homo sapiens ENSG00000019549 D
snai2 Gasterosteus aculeatus ENSGACG00000017935 I
SNAI2 Gorilla gorilla ENSGGOG00000000959 I
SNAI2 Loxodonta africana ENSLAFG00000009299 I
SNAI2 Meleagris gallopavo ENSMGAG00000010813 I
SNAI2 Microcebus murinus ENSMICG00000000335 I
SNAI2 Myotis lucifugus ENSMLUG00000001086 I
SNAI2 Macaca mulatta ENSMMUG00000016195 I
SNAI2 Monodelphis domestica ENSMODG00000010173 I
Snai2 Mus musculus ENSMUSG00000022676 D
SNAI2 Ornithorhynchus anatinus ENSOANG00000007267 I
SNAI2 Oryctolagus cuniculus ENSOCUG00000012254 I
SNAI2 Otolemur garnettii ENSOGAG00000010500 I
snai2 Oryzias latipes ENSORLG00000017475 I
SNAI2 Procavia capensis ENSPCAG00000001788 I
SNAI2 Pan troglodytes ENSPTRG00000020235 I
SNAI2 Pteropus vampyrus ENSPVAG00000009457 I
Snai2 Rattus norvegicus ENSRNOG00000047699 I
SNAI2 Taeniopygia guttata ENSTGUG00000010914 I
snai2 Tetraodon nigroviridis ENSTNIG00000008504 I
snai2 Takifugu rubripes ENSTRUG00000006860 I
snai2 Xenopus tropicalis XB-GENE-487371 I
snai2.L Xenopus laevis XB-GENE-6255814 I
snai2.S Xenopus laevis XB-GENE-865699 I
Tal_R003673 Tyto alba Tal_R003673 I
wor Drosophila melanogaster FBgn0001983 D