CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_5g038560
(
Medicago truncatula
)
Whirly
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08536 (Whirly)
IPR013742
MTR_5g038560
T350522_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES96560
Whirly
88
223
VYKGKAVLVVSPVLPKFTSSDSGTFKISKEGLMLLQFVPSAGFRQYDWNRKQVFSLSVDEMGNLINLGARESCEIFHDPFMGRSDEGKVRKVLKVEPLHDGSGHMFKLSVQNQLKNIDENIFIPVTKAEFAVFNSL
Links
Other
Whirly
family TFs
Other
Medicago truncatula
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo8g066030
Brassica oleracea
Bo8g066030
N
0.706
Cagra.0534s0030
Capsella grandiflora
Cagra.0534s0030
N
0.706
Carubv10017841m.g
Capsella rubella
Carubv10017841m.g
N
0.706
Eucgr.G02539
Eucalyptus grandis
Eucgr.G02539
N
0.706
mgf002465m
Mimulus guttatus
mgf002465m
N
0.713
PK22670.1
Cannabis sativa
PK22670.1
N
0.721
Solyc05g007100.2
Solanum lycopersicum
Solyc05g007100.2
N
0.706
TCM_011795
Theobroma cacao
TCM_011795
N
0.721
VIT_01s0026g01720
Vitis vinifera
VIT_01s0026g01720
N
0.743