TCM_011795 (Theobroma cacao)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08536 (Whirly) IPR013742 TCM_011795 T350571_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY02045 Whirly 94 229
EOY02046 Whirly 94 115
EOY02046 Whirly 113 198
EOY02047 Whirly 94 197

Links

Other Whirly family TFs
Other Theobroma cacao TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.013G077400 Gossypium raimondii Gorai.013G077400 N 0.934
evm.TU.supercontig_1007.4 Carica papaya evm.TU.supercontig_1007.4 N 0.912
cassava35817.valid.m1 Manihot esculenta cassava35817.valid.m1 N 0.904
VIT_01s0026g01720 Vitis vinifera VIT_01s0026g01720 N 0.897
Ciclev10032427m.g Citrus clementina Ciclev10032427m.g N 0.882
orange1.1g024467m.g Citrus sinensis orange1.1g024467m.g N 0.882
Cagra.0534s0030 Capsella grandiflora Cagra.0534s0030 N 0.875
Carubv10017841m.g Capsella rubella Carubv10017841m.g N 0.875
MDP0000268451 Malus domestica MDP0000268451 N 0.875
Bra016702 Brassica rapa Bra016702 N 0.868
Cagra.3501s0060 Capsella grandiflora Cagra.3501s0060 N 0.868
Bo8g066030 Brassica oleracea Bo8g066030 N 0.860
Carubv10010024m.g Capsella rubella Carubv10010024m.g N 0.860
WHY1 Arabidopsis thaliana AT1G14410 N 0.853
ATWHY1 Arabidopsis lyrata fgenesh2_kg.1__1569__AT1G14410.1 N 0.853
PRUPE_ppa009776mg Prunus persica PRUPE_ppa009776mg N 0.853
Cla022217 Citrullus lanatus Cla022217 N 0.853
Pm006558 Prunus mume Pm006558 N 0.853
Eucgr.G02539 Eucalyptus grandis Eucgr.G02539 N 0.853
PK22670.1 Cannabis sativa PK22670.1 N 0.853
WHY3 Arabidopsis thaliana AT2G02740 N 0.846
ATWHY3 Arabidopsis lyrata fgenesh2_kg.5__172__AT2G02740.1 N 0.846
PGSC0003DMG400017627 Solanum tuberosum PGSC0003DMG400017627 N 0.846
29736.m002027 Ricinus communis 29736.m002027 N 0.846
Bostr.0556s0088 Boechera stricta Bostr.0556s0088 N 0.846
Bo7g080560 Brassica oleracea Bo7g080560 N 0.838
Bra024809 Brassica rapa Bra024809 N 0.838
Solyc05g007100.2 Solanum lycopersicum Solyc05g007100.2 N 0.838
Cucsa.005520 Cucumis sativus Cucsa.005520 N 0.838
Thhalv10004763m.g Eutrema salsugineum Thhalv10004763m.g N 0.838
mgf002465m Mimulus guttatus mgf002465m N 0.831
Lus10036723.g Linum usitatissimum Lus10036723.g N 0.831
POPTR_0008s14840 Populus trichocarpa POPTR_0008s14840 N 0.816
SapurV1A.0609s0180 Salix purpurea SapurV1A.0609s0180 N 0.816
GSMUA_Achr10G21100_001 Musa acuminata GSMUA_Achr10G21100_001 N 0.809
POPTR_0010s10260 Populus trichocarpa POPTR_0010s10260 N 0.809
Lus10037206.g Linum usitatissimum Lus10037206.g N 0.806
LjSGA_053590.1 Lotus japonicus LjSGA_053590.1 N 0.805
GLYMA18G16200 Glycine max GLYMA18G16200 N 0.779
GLYMA08G40850 Glycine max GLYMA08G40850 N 0.772
LjSGA_035916.1.1 Lotus japonicus LjSGA_035916.1.1 N 0.755
Si006951m.g Setaria italica Si006951m.g N 0.750
Aquca_002_00510 Aquilegia coerulea Aquca_002_00510 N 0.750
Pavir.Da02402 Panicum virgatum Pavir.Da02402 N 0.750
Sb10g003170 Sorghum bicolor Sb10g003170 N 0.743
Pavir.Db02235 Panicum virgatum Pavir.Db02235 N 0.743
PDK_20s1701491g001 Phoenix dactylifera PDK_20s1701491g001 N 0.740
GRMZM2G155662 Zea mays GRMZM2G155662 N 0.735
MLOC_11586 Hordeum vulgare MLOC_11586 N 0.735
Traes_4AL_FE94301FD Triticum aestivum Traes_4AL_FE94301FD N 0.735
Ca_24297 Cicer arietinum Ca_24297 N 0.735
BGIOSGA022297 Oryza indica BGIOSGA022297 N 0.728
LPERR06G02670 Leersia perrieri LPERR06G02670 N 0.728
OMERI06G03280 Oryza meridionalis OMERI06G03280 N 0.728
OMERI07G11550 Oryza meridionalis OMERI07G11550 N 0.728
ONIVA06G03980 Oryza nivara ONIVA06G03980 N 0.728
OPUNC06G02750 Oryza punctata OPUNC06G02750 N 0.728
ORUFI06G03010 Oryza rufipogon ORUFI06G03010 N 0.728
OS06G0145800 Oryza sativa OS06G0145800 N 0.728
Traes_7AS_45F0BB787 Triticum aestivum Traes_7AS_45F0BB787 N 0.724
AMTR_s00133p00020030 Amborella trichopoda AMTR_s00133p00020030 N 0.721
BRADI1G51040 Brachypodium distachyon BRADI1G51040 N 0.721
MTR_5g038560 Medicago truncatula MTR_5g038560 N 0.721
OBART06G03050 Oryza barthii OBART06G03050 N 0.721
ORGLA06G0029900 Oryza glaberrima ORGLA06G0029900 N 0.721
Traes_7DS_B1FD1C84F Triticum aestivum Traes_7DS_B1FD1C84F N 0.713