cassava35817.valid.m1 (Manihot esculenta)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08536 (Whirly) IPR013742 cassava35817.valid.m1 T350598_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava35817.valid.m1 Whirly 106 241

Links

Other Whirly family TFs
Other Manihot esculenta TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29736.m002027 Ricinus communis 29736.m002027 N 0.934
evm.TU.supercontig_1007.4 Carica papaya evm.TU.supercontig_1007.4 N 0.912
TCM_011795 Theobroma cacao TCM_011795 N 0.904
Bra016702 Brassica rapa Bra016702 N 0.890
Gorai.013G077400 Gossypium raimondii Gorai.013G077400 N 0.890
VIT_01s0026g01720 Vitis vinifera VIT_01s0026g01720 N 0.882
Ciclev10032427m.g Citrus clementina Ciclev10032427m.g N 0.882
Eucgr.G02539 Eucalyptus grandis Eucgr.G02539 N 0.882
Lus10036723.g Linum usitatissimum Lus10036723.g N 0.882
orange1.1g024467m.g Citrus sinensis orange1.1g024467m.g N 0.882
WHY1 Arabidopsis thaliana AT1G14410 N 0.875
ATWHY1 Arabidopsis lyrata fgenesh2_kg.1__1569__AT1G14410.1 N 0.875
Cagra.3501s0060 Capsella grandiflora Cagra.3501s0060 N 0.875
MDP0000268451 Malus domestica MDP0000268451 N 0.875
WHY3 Arabidopsis thaliana AT2G02740 N 0.868
Bo7g080560 Brassica oleracea Bo7g080560 N 0.868
Bo8g066030 Brassica oleracea Bo8g066030 N 0.868
Bra024809 Brassica rapa Bra024809 N 0.868
ATWHY3 Arabidopsis lyrata fgenesh2_kg.5__172__AT2G02740.1 N 0.868
PRUPE_ppa009776mg Prunus persica PRUPE_ppa009776mg N 0.868
Pm006558 Prunus mume Pm006558 N 0.868
Cagra.0534s0030 Capsella grandiflora Cagra.0534s0030 N 0.868
Carubv10010024m.g Capsella rubella Carubv10010024m.g N 0.868
Carubv10017841m.g Capsella rubella Carubv10017841m.g N 0.868
Thhalv10004763m.g Eutrema salsugineum Thhalv10004763m.g N 0.868
PGSC0003DMG400017627 Solanum tuberosum PGSC0003DMG400017627 N 0.860
POPTR_0010s10260 Populus trichocarpa POPTR_0010s10260 N 0.853
Solyc05g007100.2 Solanum lycopersicum Solyc05g007100.2 N 0.853
Bostr.0556s0088 Boechera stricta Bostr.0556s0088 N 0.853
SapurV1A.0609s0180 Salix purpurea SapurV1A.0609s0180 N 0.853
Cla022217 Citrullus lanatus Cla022217 N 0.846
mgf002465m Mimulus guttatus mgf002465m N 0.846
PK22670.1 Cannabis sativa PK22670.1 N 0.846
POPTR_0008s14840 Populus trichocarpa POPTR_0008s14840 N 0.831
Cucsa.005520 Cucumis sativus Cucsa.005520 N 0.824
GSMUA_Achr10G21100_001 Musa acuminata GSMUA_Achr10G21100_001 N 0.801
Aquca_002_00510 Aquilegia coerulea Aquca_002_00510 N 0.787
LjSGA_053590.1 Lotus japonicus LjSGA_053590.1 N 0.780
GLYMA18G16200 Glycine max GLYMA18G16200 N 0.779
GLYMA08G40850 Glycine max GLYMA08G40850 N 0.765
Si006951m.g Setaria italica Si006951m.g N 0.757
Pavir.Da02402 Panicum virgatum Pavir.Da02402 N 0.757
LjSGA_035916.1.1 Lotus japonicus LjSGA_035916.1.1 N 0.755
Sb10g003170 Sorghum bicolor Sb10g003170 N 0.750
Pavir.Db02235 Panicum virgatum Pavir.Db02235 N 0.750
PDK_20s1701491g001 Phoenix dactylifera PDK_20s1701491g001 N 0.750
AMTR_s00133p00020030 Amborella trichopoda AMTR_s00133p00020030 N 0.743
GRMZM2G155662 Zea mays GRMZM2G155662 N 0.743
Ca_24297 Cicer arietinum Ca_24297 N 0.735
BRADI1G51040 Brachypodium distachyon BRADI1G51040 N 0.728
MLOC_11586 Hordeum vulgare MLOC_11586 N 0.728
Traes_4AL_FE94301FD Triticum aestivum Traes_4AL_FE94301FD N 0.728
Traes_7AS_45F0BB787 Triticum aestivum Traes_7AS_45F0BB787 N 0.711
BGIOSGA022297 Oryza indica BGIOSGA022297 N 0.706
LPERR06G02670 Leersia perrieri LPERR06G02670 N 0.706
OBART06G03050 Oryza barthii OBART06G03050 N 0.706
OMERI06G03280 Oryza meridionalis OMERI06G03280 N 0.706
OMERI07G11550 Oryza meridionalis OMERI07G11550 N 0.706
ONIVA06G03980 Oryza nivara ONIVA06G03980 N 0.706
OPUNC06G02750 Oryza punctata OPUNC06G02750 N 0.706
ORGLA06G0029900 Oryza glaberrima ORGLA06G0029900 N 0.706
ORUFI06G03010 Oryza rufipogon ORUFI06G03010 N 0.706
OS06G0145800 Oryza sativa OS06G0145800 N 0.706
Traes_7DS_B1FD1C84F Triticum aestivum Traes_7DS_B1FD1C84F N 0.701