AMTR_s00133p00020030 (Amborella trichopoda)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08536 (Whirly) IPR013742 AMTR_s00133p00020030 T350471_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERN04401 Whirly 98 233

Links

Other Whirly family TFs
Other Amborella trichopoda TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VIT_01s0026g01720 Vitis vinifera VIT_01s0026g01720 N 0.772
GSMUA_Achr10G21100_001 Musa acuminata GSMUA_Achr10G21100_001 N 0.765
WHY3 Arabidopsis thaliana AT2G02740 N 0.757
Bra024809 Brassica rapa Bra024809 N 0.757
ATWHY3 Arabidopsis lyrata fgenesh2_kg.5__172__AT2G02740.1 N 0.757
POPTR_0010s10260 Populus trichocarpa POPTR_0010s10260 N 0.757
29736.m002027 Ricinus communis 29736.m002027 N 0.757
Aquca_002_00510 Aquilegia coerulea Aquca_002_00510 N 0.750
Bostr.0556s0088 Boechera stricta Bostr.0556s0088 N 0.750
Cagra.0534s0030 Capsella grandiflora Cagra.0534s0030 N 0.750
Cagra.3501s0060 Capsella grandiflora Cagra.3501s0060 N 0.750
Carubv10017841m.g Capsella rubella Carubv10017841m.g N 0.750
Lus10036723.g Linum usitatissimum Lus10036723.g N 0.750
Thhalv10004763m.g Eutrema salsugineum Thhalv10004763m.g N 0.750
PDK_20s1701491g001 Phoenix dactylifera PDK_20s1701491g001 N 0.750
Bo7g080560 Brassica oleracea Bo7g080560 N 0.743
cassava35817.valid.m1 Manihot esculenta cassava35817.valid.m1 N 0.743
Carubv10010024m.g Capsella rubella Carubv10010024m.g N 0.743
SapurV1A.0609s0180 Salix purpurea SapurV1A.0609s0180 N 0.743
PK22670.1 Cannabis sativa PK22670.1 N 0.743
LjSGA_035916.1.1 Lotus japonicus LjSGA_035916.1.1 N 0.736
Si006951m.g Setaria italica Si006951m.g N 0.735
Eucgr.G02539 Eucalyptus grandis Eucgr.G02539 N 0.735
evm.TU.supercontig_1007.4 Carica papaya evm.TU.supercontig_1007.4 N 0.735
Pavir.Da02402 Panicum virgatum Pavir.Da02402 N 0.735
Bo8g066030 Brassica oleracea Bo8g066030 N 0.728
Bra016702 Brassica rapa Bra016702 N 0.728
ATWHY1 Arabidopsis lyrata fgenesh2_kg.1__1569__AT1G14410.1 N 0.728
Sb10g003170 Sorghum bicolor Sb10g003170 N 0.728
Solyc05g007100.2 Solanum lycopersicum Solyc05g007100.2 N 0.728
mgf002465m Mimulus guttatus mgf002465m N 0.728
MDP0000268451 Malus domestica MDP0000268451 N 0.728
Pavir.Db02235 Panicum virgatum Pavir.Db02235 N 0.728
WHY1 Arabidopsis thaliana AT1G14410 N 0.721
GRMZM2G155662 Zea mays GRMZM2G155662 N 0.721
PGSC0003DMG400017627 Solanum tuberosum PGSC0003DMG400017627 N 0.721
PRUPE_ppa009776mg Prunus persica PRUPE_ppa009776mg N 0.721
TCM_011795 Theobroma cacao TCM_011795 N 0.721
Pm006558 Prunus mume Pm006558 N 0.721
Gorai.013G077400 Gossypium raimondii Gorai.013G077400 N 0.717
BGIOSGA022297 Oryza indica BGIOSGA022297 N 0.713
GLYMA18G16200 Glycine max GLYMA18G16200 N 0.713
LPERR06G02670 Leersia perrieri LPERR06G02670 N 0.713
MLOC_11586 Hordeum vulgare MLOC_11586 N 0.713
OMERI06G03280 Oryza meridionalis OMERI06G03280 N 0.713
OMERI07G11550 Oryza meridionalis OMERI07G11550 N 0.713
ONIVA06G03980 Oryza nivara ONIVA06G03980 N 0.713
OPUNC06G02750 Oryza punctata OPUNC06G02750 N 0.713
ORUFI06G03010 Oryza rufipogon ORUFI06G03010 N 0.713
OS06G0145800 Oryza sativa OS06G0145800 N 0.713
POPTR_0008s14840 Populus trichocarpa POPTR_0008s14840 N 0.713
Traes_4AL_FE94301FD Triticum aestivum Traes_4AL_FE94301FD N 0.713
Traes_7AS_45F0BB787 Triticum aestivum Traes_7AS_45F0BB787 N 0.711
BRADI1G51040 Brachypodium distachyon BRADI1G51040 N 0.706
GLYMA08G40850 Glycine max GLYMA08G40850 N 0.706
OBART06G03050 Oryza barthii OBART06G03050 N 0.706
ORGLA06G0029900 Oryza glaberrima ORGLA06G0029900 N 0.706
Ciclev10032427m.g Citrus clementina Ciclev10032427m.g N 0.706
orange1.1g024467m.g Citrus sinensis orange1.1g024467m.g N 0.706
Traes_7DS_B1FD1C84F Triticum aestivum Traes_7DS_B1FD1C84F N 0.701