Eucgr.G02539 (Eucalyptus grandis)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08536 (Whirly) IPR013742 Eucgr.G02539 T350624_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.G02539.1 Whirly 108 243
Eucgr.G02539.2 Whirly 106 241
Eucgr.G02539.3 Whirly 108 243
Eucgr.G02539.4 Whirly 108 194

Links

Other Whirly family TFs
Other Eucalyptus grandis TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10032427m.g Citrus clementina Ciclev10032427m.g N 0.890
orange1.1g024467m.g Citrus sinensis orange1.1g024467m.g N 0.890
cassava35817.valid.m1 Manihot esculenta cassava35817.valid.m1 N 0.882
Cla022217 Citrullus lanatus Cla022217 N 0.868
29736.m002027 Ricinus communis 29736.m002027 N 0.868
MDP0000268451 Malus domestica MDP0000268451 N 0.868
PRUPE_ppa009776mg Prunus persica PRUPE_ppa009776mg N 0.860
Pm006558 Prunus mume Pm006558 N 0.860
evm.TU.supercontig_1007.4 Carica papaya evm.TU.supercontig_1007.4 N 0.860
Gorai.013G077400 Gossypium raimondii Gorai.013G077400 N 0.858
TCM_011795 Theobroma cacao TCM_011795 N 0.853
PK22670.1 Cannabis sativa PK22670.1 N 0.853
Bra016702 Brassica rapa Bra016702 N 0.846
Cucsa.005520 Cucumis sativus Cucsa.005520 N 0.846
SapurV1A.0609s0180 Salix purpurea SapurV1A.0609s0180 N 0.846
WHY1 Arabidopsis thaliana AT1G14410 N 0.838
WHY3 Arabidopsis thaliana AT2G02740 N 0.838
Bo8g066030 Brassica oleracea Bo8g066030 N 0.838
ATWHY1 Arabidopsis lyrata fgenesh2_kg.1__1569__AT1G14410.1 N 0.838
ATWHY3 Arabidopsis lyrata fgenesh2_kg.5__172__AT2G02740.1 N 0.838
PGSC0003DMG400017627 Solanum tuberosum PGSC0003DMG400017627 N 0.838
VIT_01s0026g01720 Vitis vinifera VIT_01s0026g01720 N 0.838
Bostr.0556s0088 Boechera stricta Bostr.0556s0088 N 0.838
Cagra.0534s0030 Capsella grandiflora Cagra.0534s0030 N 0.838
Carubv10017841m.g Capsella rubella Carubv10017841m.g N 0.838
Bo7g080560 Brassica oleracea Bo7g080560 N 0.831
Bra024809 Brassica rapa Bra024809 N 0.831
Solyc05g007100.2 Solanum lycopersicum Solyc05g007100.2 N 0.831
mgf002465m Mimulus guttatus mgf002465m N 0.831
Lus10036723.g Linum usitatissimum Lus10036723.g N 0.831
Thhalv10004763m.g Eutrema salsugineum Thhalv10004763m.g N 0.831
LjSGA_035916.1.1 Lotus japonicus LjSGA_035916.1.1 N 0.830
POPTR_0008s14840 Populus trichocarpa POPTR_0008s14840 N 0.824
Cagra.3501s0060 Capsella grandiflora Cagra.3501s0060 N 0.824
GLYMA18G16200 Glycine max GLYMA18G16200 N 0.816
POPTR_0010s10260 Populus trichocarpa POPTR_0010s10260 N 0.816
Carubv10010024m.g Capsella rubella Carubv10010024m.g N 0.816
GLYMA08G40850 Glycine max GLYMA08G40850 N 0.801
GSMUA_Achr10G21100_001 Musa acuminata GSMUA_Achr10G21100_001 N 0.801
Aquca_002_00510 Aquilegia coerulea Aquca_002_00510 N 0.772
GRMZM2G155662 Zea mays GRMZM2G155662 N 0.753
Pavir.Db02235 Panicum virgatum Pavir.Db02235 N 0.750
LjSGA_053590.1 Lotus japonicus LjSGA_053590.1 N 0.744
Sb10g003170 Sorghum bicolor Sb10g003170 N 0.743
Si006951m.g Setaria italica Si006951m.g N 0.743
Ca_24297 Cicer arietinum Ca_24297 N 0.743
Pavir.Da02402 Panicum virgatum Pavir.Da02402 N 0.743
AMTR_s00133p00020030 Amborella trichopoda AMTR_s00133p00020030 N 0.735
BRADI1G51040 Brachypodium distachyon BRADI1G51040 N 0.735
PDK_20s1701491g001 Phoenix dactylifera PDK_20s1701491g001 N 0.730
MLOC_11586 Hordeum vulgare MLOC_11586 N 0.728
Traes_4AL_FE94301FD Triticum aestivum Traes_4AL_FE94301FD N 0.728
BGIOSGA022297 Oryza indica BGIOSGA022297 N 0.721
LPERR06G02670 Leersia perrieri LPERR06G02670 N 0.721
OBART06G03050 Oryza barthii OBART06G03050 N 0.721
OMERI06G03280 Oryza meridionalis OMERI06G03280 N 0.721
OMERI07G11550 Oryza meridionalis OMERI07G11550 N 0.721
ONIVA06G03980 Oryza nivara ONIVA06G03980 N 0.721
OPUNC06G02750 Oryza punctata OPUNC06G02750 N 0.721
ORGLA06G0029900 Oryza glaberrima ORGLA06G0029900 N 0.721
ORUFI06G03010 Oryza rufipogon ORUFI06G03010 N 0.721
OS06G0145800 Oryza sativa OS06G0145800 N 0.721
Traes_7DS_B1FD1C84F Triticum aestivum Traes_7DS_B1FD1C84F N 0.713
MTR_5g038560 Medicago truncatula MTR_5g038560 N 0.706