Bra016702 (Brassica rapa)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08536 (Whirly) IPR013742 Bra016702 T350483_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra016702.1-P Whirly 93 228

Links

Other Whirly family TFs
Other Brassica rapa TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo8g066030 Brassica oleracea Bo8g066030 N 0.971
WHY1 Arabidopsis thaliana AT1G14410 N 0.941
ATWHY1 Arabidopsis lyrata fgenesh2_kg.1__1569__AT1G14410.1 N 0.941
Carubv10010024m.g Capsella rubella Carubv10010024m.g N 0.934
Cagra.3501s0060 Capsella grandiflora Cagra.3501s0060 N 0.926
evm.TU.supercontig_1007.4 Carica papaya evm.TU.supercontig_1007.4 N 0.919
Thhalv10004763m.g Eutrema salsugineum Thhalv10004763m.g N 0.912
Bo7g080560 Brassica oleracea Bo7g080560 N 0.904
Bra024809 Brassica rapa Bra024809 N 0.904
WHY3 Arabidopsis thaliana AT2G02740 N 0.897
ATWHY3 Arabidopsis lyrata fgenesh2_kg.5__172__AT2G02740.1 N 0.897
cassava35817.valid.m1 Manihot esculenta cassava35817.valid.m1 N 0.890
Gorai.013G077400 Gossypium raimondii Gorai.013G077400 N 0.890
Bostr.0556s0088 Boechera stricta Bostr.0556s0088 N 0.882
Cagra.0534s0030 Capsella grandiflora Cagra.0534s0030 N 0.882
Carubv10017841m.g Capsella rubella Carubv10017841m.g N 0.882
Ciclev10032427m.g Citrus clementina Ciclev10032427m.g N 0.875
orange1.1g024467m.g Citrus sinensis orange1.1g024467m.g N 0.875
TCM_011795 Theobroma cacao TCM_011795 N 0.868
Cla022217 Citrullus lanatus Cla022217 N 0.868
MDP0000268451 Malus domestica MDP0000268451 N 0.868
PRUPE_ppa009776mg Prunus persica PRUPE_ppa009776mg N 0.853
VIT_01s0026g01720 Vitis vinifera VIT_01s0026g01720 N 0.853
Pm006558 Prunus mume Pm006558 N 0.853
29736.m002027 Ricinus communis 29736.m002027 N 0.846
mgf002465m Mimulus guttatus mgf002465m N 0.846
Eucgr.G02539 Eucalyptus grandis Eucgr.G02539 N 0.846
Lus10036723.g Linum usitatissimum Lus10036723.g N 0.846
SapurV1A.0609s0180 Salix purpurea SapurV1A.0609s0180 N 0.838
Solyc05g007100.2 Solanum lycopersicum Solyc05g007100.2 N 0.831
Cucsa.005520 Cucumis sativus Cucsa.005520 N 0.831
PK22670.1 Cannabis sativa PK22670.1 N 0.831
PGSC0003DMG400017627 Solanum tuberosum PGSC0003DMG400017627 N 0.824
POPTR_0008s14840 Populus trichocarpa POPTR_0008s14840 N 0.824
POPTR_0010s10260 Populus trichocarpa POPTR_0010s10260 N 0.816
Aquca_002_00510 Aquilegia coerulea Aquca_002_00510 N 0.809
GSMUA_Achr10G21100_001 Musa acuminata GSMUA_Achr10G21100_001 N 0.801
LjSGA_035916.1.1 Lotus japonicus LjSGA_035916.1.1 N 0.792
GLYMA18G16200 Glycine max GLYMA18G16200 N 0.772
GLYMA08G40850 Glycine max GLYMA08G40850 N 0.765
Ca_24297 Cicer arietinum Ca_24297 N 0.765
Si006951m.g Setaria italica Si006951m.g N 0.757
Pavir.Da02402 Panicum virgatum Pavir.Da02402 N 0.757
Sb10g003170 Sorghum bicolor Sb10g003170 N 0.750
Pavir.Db02235 Panicum virgatum Pavir.Db02235 N 0.750
GRMZM2G155662 Zea mays GRMZM2G155662 N 0.743
Traes_7DS_B1FD1C84F Triticum aestivum Traes_7DS_B1FD1C84F N 0.736
BRADI1G51040 Brachypodium distachyon BRADI1G51040 N 0.735
MLOC_11586 Hordeum vulgare MLOC_11586 N 0.735
Traes_4AL_FE94301FD Triticum aestivum Traes_4AL_FE94301FD N 0.735
LjSGA_053590.1 Lotus japonicus LjSGA_053590.1 N 0.732
AMTR_s00133p00020030 Amborella trichopoda AMTR_s00133p00020030 N 0.728
BGIOSGA022297 Oryza indica BGIOSGA022297 N 0.721
LPERR06G02670 Leersia perrieri LPERR06G02670 N 0.721
OBART06G03050 Oryza barthii OBART06G03050 N 0.721
OMERI06G03280 Oryza meridionalis OMERI06G03280 N 0.721
OMERI07G11550 Oryza meridionalis OMERI07G11550 N 0.721
ONIVA06G03980 Oryza nivara ONIVA06G03980 N 0.721
OPUNC06G02750 Oryza punctata OPUNC06G02750 N 0.721
ORGLA06G0029900 Oryza glaberrima ORGLA06G0029900 N 0.721
ORUFI06G03010 Oryza rufipogon ORUFI06G03010 N 0.721
OS06G0145800 Oryza sativa OS06G0145800 N 0.721
PDK_20s1701491g001 Phoenix dactylifera PDK_20s1701491g001 N 0.710