TCM_005483 (Theobroma cacao)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08879 (WRC) IPR014977 TCM_005483 T351301_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRF9
M07370_2.00 		Arabidopsis thaliana
NTGTCAGANNHNNVH
DBNNDNNTCTGACAN		 Dap-seq
OMalley et al.(2016)
GRF9_col_a 		0.718 0.718
GRF9
M07371_2.00 		Arabidopsis thaliana
TGTCAGAN
NTCTGACA		 Dap-seq
OMalley et al.(2016)
GRF9_colamp_a 		0.718 0.718
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOX96174 WRC 144 186
EOX96174 WRC 343 384

Links

Other WRC family TFs
Other Theobroma cacao TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30174.m008910 Ricinus communis 30174.m008910 N 0.750
AtGRF9 Vitis vinifera VIT_15s0048g01740 I 0.904
AtGRF9 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4002259 I 0.706
Bo4g195580 Brassica oleracea Bo4g195580 I 0.721
Bostr.25993s0227 Boechera stricta Bostr.25993s0227 I 0.729
Bra039334 Brassica rapa Bra039334 I 0.721
Cagra.0698s0014 Capsella grandiflora Cagra.0698s0014 I 0.729
Carubv10023501m.g Capsella rubella Carubv10023501m.g I 0.729
cassava28657.m1 Manihot esculenta cassava28657.m1 I 0.800
cassava36905.valid.m1 Manihot esculenta cassava36905.valid.m1 N 0.756
Ca_19588 Cicer arietinum Ca_19588 I 0.733
Cla021612 Citrullus lanatus Cla021612 N 0.814
Cucsa.257800 Cucumis sativus Cucsa.257800 N 0.837
gene19384-v1.0-hybrid Fragaria vesca gene19384-v1.0-hybrid N 0.733
GLYMA01G34650 Glycine max GLYMA01G34650 N 0.733
GLYMA03G02500 Glycine max GLYMA03G02500 N 0.733
Gorai.007G092400 Gossypium raimondii Gorai.007G092400 N 0.906
GRF9 Arabidopsis thaliana AT2G45480 D 0.718
MDP0000204597 Malus domestica MDP0000204597 N 0.791
MTR_8g035910 Medicago truncatula MTR_8g035910 N 0.709
PGSC0003DMG400012767 Solanum tuberosum PGSC0003DMG400012767 N 0.726
PK07653.1 Cannabis sativa PK07653.1 I 0.895
Pm017948 Prunus mume Pm017948 N 0.802
POPTR_0014s06750 Populus trichocarpa POPTR_0014s06750 I 0.788
PRUPE_ppa021277mg Prunus persica PRUPE_ppa021277mg N 0.814
SapurV1A.0532s0070 Salix purpurea SapurV1A.0532s0070 N 0.767
Solyc01g091540.1 Solanum lycopersicum Solyc01g091540.1 N 0.726
Thhalv10001460m.g Eutrema salsugineum Thhalv10001460m.g I 0.718