CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla021612
(
Citrullus lanatus
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08879 (WRC)
IPR014977
Cla021612
T351400_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla021612
WRC
154
196
PEPGRCRRTDGKKWRCSQKTVPHQKYCERHMHRGRQRSRKPVE
Cla021612
WRC
390
432
LEPGRCRRTDGKKWRCRRDVIPNQKYCALHMHRGSKKHLKPFQ
Links
Other
WRC
family TFs
Other
Citrullus lanatus
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30174.m008910
Ricinus communis
30174.m008910
N
0.744
AtGRF9
Vitis vinifera
VIT_15s0048g01740
I
0.814
Bo4g195580
Brassica oleracea
Bo4g195580
I
0.744
Bostr.25993s0227
Boechera stricta
Bostr.25993s0227
I
0.709
Bra039334
Brassica rapa
Bra039334
I
0.744
Cagra.0698s0014
Capsella grandiflora
Cagra.0698s0014
I
0.709
Carubv10023501m.g
Capsella rubella
Carubv10023501m.g
I
0.709
cassava28657.m1
Manihot esculenta
cassava28657.m1
I
0.753
cassava36905.valid.m1
Manihot esculenta
cassava36905.valid.m1
N
0.744
Ca_19588
Cicer arietinum
Ca_19588
I
0.733
Cucsa.257800
Cucumis sativus
Cucsa.257800
N
0.953
gene19384-v1.0-hybrid
Fragaria vesca
gene19384-v1.0-hybrid
N
0.721
GLYMA01G34650
Glycine max
GLYMA01G34650
N
0.733
GLYMA03G02500
Glycine max
GLYMA03G02500
N
0.733
Gorai.007G092400
Gossypium raimondii
Gorai.007G092400
N
0.767
MDP0000204597
Malus domestica
MDP0000204597
N
0.779
MTR_8g035910
Medicago truncatula
MTR_8g035910
N
0.733
PK07653.1
Cannabis sativa
PK07653.1
I
0.837
Pm017948
Prunus mume
Pm017948
N
0.791
POPTR_0014s06750
Populus trichocarpa
POPTR_0014s06750
I
0.814
PRUPE_ppa021277mg
Prunus persica
PRUPE_ppa021277mg
N
0.779
SapurV1A.0532s0070
Salix purpurea
SapurV1A.0532s0070
N
0.791
TCM_005483
Theobroma cacao
TCM_005483
I
0.814
Thhalv10001460m.g
Eutrema salsugineum
Thhalv10001460m.g
I
0.709