LjT35F01.80.nd (Lotus japonicus)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 LjT35F01.80.nd T351822_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G42040
M01088_2.00 		Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN		 PBM
Sullivan et al.(2014)
pTH7503 		0.837 0.837
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjT35F01.80.nd WRC 75 117

Links

Other WRC family TFs
Other Lotus japonicus TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29613.m000377 Ricinus communis 29613.m000377 I 0.930
29613.m000379 Ricinus communis 29613.m000379 I 0.953
Aquca_014_00855 Aquilegia coerulea Aquca_014_00855 I 0.814
AT2G42040 Arabidopsis thaliana AT2G42040 D 0.837
BGIOSGA005516 Oryza indica BGIOSGA005516 I 0.837
BGIOSGA022518 Oryza indica BGIOSGA022518 I 0.833
Bo3g035920 Brassica oleracea Bo3g035920 I 0.814
Bo4g014690 Brassica oleracea Bo4g014690 I 0.791
Bo4g191280 Brassica oleracea Bo4g191280 I 0.791
Bostr.25993s0574 Boechera stricta Bostr.25993s0574 I 0.833
Bra000251 Brassica rapa Bra000251 I 0.814
Bra004667 Brassica rapa Bra004667 I 0.767
Bra016897 Brassica rapa Bra016897 I 0.791
BRADI1G46270 Brachypodium distachyon BRADI1G46270 I 0.814
Cagra.13389s0020 Capsella grandiflora Cagra.13389s0020 I 0.833
Carubv10023878m.g Capsella rubella Carubv10023878m.g I 0.833
cassava31648.valid.m1 Manihot esculenta cassava31648.valid.m1 I 0.953
cassava36463.valid.m1 Manihot esculenta cassava36463.valid.m1 I 0.953
cassava36464.valid.m1 Manihot esculenta cassava36464.valid.m1 I 0.953
Ca_07320 Cicer arietinum Ca_07320 I 0.953
Ciclev10012160m.g Citrus clementina Ciclev10012160m.g I 0.953
Cucsa.242590 Cucumis sativus Cucsa.242590 I 0.930
Eucgr.A02456 Eucalyptus grandis Eucgr.A02456 I 0.953
evm.TU.supercontig_85.54 Carica papaya evm.TU.supercontig_85.54 I 0.953
F775_01928 Aegilops tauschii F775_01928 I 0.875
fgenesh2_kg.4__2350__AT2G42040.1 Arabidopsis lyrata fgenesh2_kg.4__2350__AT2G42040.1 I 0.837
gene00456-v1.0-hybrid Fragaria vesca gene00456-v1.0-hybrid I 0.930
GLYMA02G28962 Glycine max GLYMA02G28962 I 0.930
GLYMA03G30170 Glycine max GLYMA03G30170 I 0.953
GLYMA09G16841 Glycine max GLYMA09G16841 I 0.953
GLYMA19G33070 Glycine max GLYMA19G33070 I 0.953
Gorai.002G156300 Gossypium raimondii Gorai.002G156300 I 0.930
Gorai.012G100300 Gossypium raimondii Gorai.012G100300 I 0.953
GRMZM2G033915 Zea mays GRMZM2G033915 I 0.814
GRMZM2G134552 Zea mays GRMZM2G134552 N 0.762
GRMZM2G165991 Zea mays GRMZM2G165991 I 0.780
GSMUA_Achr10G29530_001 Musa acuminata GSMUA_Achr10G29530_001 I 0.953
GSMUA_Achr3G07730_001 Musa acuminata GSMUA_Achr3G07730_001 I 0.977
GSMUA_Achr3G20210_001 Musa acuminata GSMUA_Achr3G20210_001 I 0.907
GSMUA_Achr7G18600_001 Musa acuminata GSMUA_Achr7G18600_001 I 0.953
GSMUA_Achr9G15730_001 Musa acuminata GSMUA_Achr9G15730_001 I 0.953
LPERR02G28190 Leersia perrieri LPERR02G28190 I 0.881
LPERR06G06210 Leersia perrieri LPERR06G06210 I 0.810
Lus10004164.g Linum usitatissimum Lus10004164.g I 0.756
Lus10021062.g Linum usitatissimum Lus10021062.g I 0.738
MDP0000121493 Malus domestica MDP0000121493 I 0.930
MDP0000154434 Malus domestica MDP0000154434 I 0.953
mgf007626m Mimulus guttatus mgf007626m I 0.814
MLOC_17575 Hordeum vulgare MLOC_17575 I 0.814
MTR_1g054175 Medicago truncatula MTR_1g054175 I 0.953
MTR_7g093350 Medicago truncatula MTR_7g093350 I 0.953
MTR_7g093360 Medicago truncatula MTR_7g093360 I 0.953
OB06G16230 Oryza brachyantha OB06G16230 I 0.814
OBART06G06800 Oryza barthii OBART06G06800 I 0.837
OGLUM02G35430 Oryza glumaepatula OGLUM02G35430 I 0.837
OGLUM06G07170 Oryza glumaepatula OGLUM06G07170 I 0.833
OMERI02G32570 Oryza meridionalis OMERI02G32570 I 0.837
OMERI06G07980 Oryza meridionalis OMERI06G07980 I 0.829
ONIVA02G36360 Oryza nivara ONIVA02G36360 I 0.837
ONIVA06G08110 Oryza nivara ONIVA06G08110 I 0.833
OPUNC02G31650 Oryza punctata OPUNC02G31650 I 0.837
OPUNC06G06450 Oryza punctata OPUNC06G06450 I 0.837
orange1.1g019760m.g Citrus sinensis orange1.1g019760m.g I 0.953
ORGLA02G0296600 Oryza glaberrima ORGLA02G0296600 I 0.837
ORGLA06G0063300 Oryza glaberrima ORGLA06G0063300 I 0.833
ORUFI02G35820 Oryza rufipogon ORUFI02G35820 I 0.837
ORUFI06G07050 Oryza rufipogon ORUFI06G07050 I 0.833
OS02G0773600 Oryza sativa OS02G0773600 I 0.837
OS06G0207600 Oryza sativa OS06G0207600 I 0.833
Pavir.Aa00328 Panicum virgatum Pavir.Aa00328 N 0.738
Pavir.J07916 Panicum virgatum Pavir.J07916 N 0.738
Pavir.J23833 Panicum virgatum Pavir.J23833 I 0.857
Pavir.J25248 Panicum virgatum Pavir.J25248 I 0.857
PDK_20s1436981g002 Phoenix dactylifera PDK_20s1436981g002 I 0.884
PGSC0003DMG400023669 Solanum tuberosum PGSC0003DMG400023669 I 0.884
PK26699.1 Cannabis sativa PK26699.1 I 0.930
Pm025936 Prunus mume Pm025936 I 0.953
POPTR_0006s20770 Populus trichocarpa POPTR_0006s20770 I 0.930
POPTR_0006s20790 Populus trichocarpa POPTR_0006s20790 I 0.953
POPTR_0016s05840 Populus trichocarpa POPTR_0016s05840 I 0.953
POPTR_0016s05850 Populus trichocarpa POPTR_0016s05850 I 0.930
PRUPE_ppa016277mg Prunus persica PRUPE_ppa016277mg I 0.953
SapurV1A.0251s0220 Salix purpurea SapurV1A.0251s0220 I 0.907
SapurV1A.0251s0230 Salix purpurea SapurV1A.0251s0230 I 0.930
SapurV1A.0854s0090 Salix purpurea SapurV1A.0854s0090 I 0.953
SapurV1A.0854s0100 Salix purpurea SapurV1A.0854s0100 I 0.907
SapurV1A.3188s0010 Salix purpurea SapurV1A.3188s0010 I 0.907
Sb10g006810 Sorghum bicolor Sb10g006810 I 0.857
Si019733m.g Setaria italica Si019733m.g N 0.738
Solyc10g080530.1 Solanum lycopersicum Solyc10g080530.1 I 0.884
TCM_024932 Theobroma cacao TCM_024932 I 0.953
Thhalv10017052m.g Eutrema salsugineum Thhalv10017052m.g I 0.837
VIT_08s0007g06640 Vitis vinifera VIT_08s0007g06640 I 0.953
VIT_08s0007g06690 Vitis vinifera VIT_08s0007g06690 I 0.860