CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GLYMA19G40470 *(Glycine max)* WRKY
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03106 (WRKY)	IPR003657	GLYMA19G40470	T352782_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
WRKY21 M02553_2.00	Arabidopsis thaliana	NNRGTCAAMN	NKTTGACYNN	PBM Weirauch et al.(2014) pTH7422	0.874	0.712
WRKY21 M07389_2.00	Arabidopsis thaliana	HAAAGTCAACNNH	DNNGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_colamp_a	0.874	0.712
WRKY21 M07390_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_col	0.874	0.712
WRKY22 M02557_2.00	Arabidopsis thaliana	NNNKTMHDNN	NNHDKAMNNN	PBM Weirauch et al.(2014) pTH7320	0.873	0.780
WRKY22 M07400_2.00	Arabidopsis thaliana	AAAAGTCAACKNH	DNMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY22_colamp_a	0.873	0.780
WRKY22 M07401_2.00	Arabidopsis thaliana	NAAAGTCAACKNH	DNMGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY22_col	0.873	0.780
WRKY65 M07372_2.00	Arabidopsis thaliana	NWWAGTCAACG	CGTTGACTWWN	Dap-seq OMalley et al.(2016) WRKY65_col_a	0.872	0.763
WRKY65 M07373_2.00	Arabidopsis thaliana	NAAAGTCAACGN	NCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY65_colamp_a	0.872	0.763
WRKY14 M00731_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Chang et al.(2013) pTH7570	0.868	0.814
WRKY14 M07375_2.00	Arabidopsis thaliana	NAAAGTCAACGNN	NNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_col_a	0.868	0.814
WRKY14 M07376_2.00	Arabidopsis thaliana	NAAAGTCAACGNH	DNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_colamp_a	0.868	0.814
WRKY27 M02566_2.00	Arabidopsis thaliana	NNGTCHDNN	NNHDGACNN	PBM Weirauch et al.(2014) pTH8188	0.867	0.695
WRKY27 M07430_2.00	Arabidopsis thaliana	MAAAGTCAACKNH	DNMGTTGACTTTK	Dap-seq OMalley et al.(2016) WRKY27_col_a	0.867	0.695
WRKY27 M07431_2.00	Arabidopsis thaliana	HAAAGTCAACKNH	DNMGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY27_colamp_a	0.867	0.695
WRKY17 M02550_2.00	Arabidopsis thaliana	NNDGTCAAHN	NDTTGACHNN	PBM Weirauch et al.(2014) pTH8088	0.849	0.661
WRKY17 M07385_2.00	Arabidopsis thaliana	NHAAAGTCAACRNN	NNYGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY17_col_a	0.849	0.661
WRKY17 M07386_2.00	Arabidopsis thaliana	NMAAAGTCAACGN	NCGTTGACTTTKN	Dap-seq OMalley et al.(2016) WRKY17_colamp_a	0.849	0.661
WRKY29 M02558_2.00	Arabidopsis thaliana	NNNGTCHDNN	NNHDGACNNN	PBM Weirauch et al.(2014) pTH9604	0.849	0.678
WRKY29 M07410_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY29_col_a	0.849	0.678
WRKY29 M07411_2.00	Arabidopsis thaliana	HWWAGTCAAMDNN	NNHKTTGACTWWD	Dap-seq OMalley et al.(2016) WRKY29_colamp_a	0.849	0.678
WRKY11 M02559_2.00	Arabidopsis thaliana	NDGTCAAHNN	NNDTTGACHN	PBM Weirauch et al.(2014) pTH8091	0.848	0.661
WRKY11 M07415_2.00	Arabidopsis thaliana	NHAAAGTCAACBNH	DNVGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY11_col_a	0.848	0.661
WRKY11 M11464_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY11_Q2	0.848	0.661
WRKY15 M02549_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Weirauch et al.(2014) pTH7602	0.848	0.678
WRKY15 M07383_2.00	Arabidopsis thaliana	AAAAGTCAACKN	NMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY15_colamp_a	0.848	0.678
WRKY15 M07384_2.00	Arabidopsis thaliana	NWAAGTCAACB	VGTTGACTTWN	Dap-seq OMalley et al.(2016) WRKY15_col_b	0.848	0.678
WRKY7 M07412_2.00	Arabidopsis thaliana	NNDDDNNNNMAAAGTCAACGV	BCGTTGACTTTKNNNNHHHNN	Dap-seq OMalley et al.(2016) WRKY7_colamp_a	0.845	0.695
WRKY7 M07413_2.00	Arabidopsis thaliana	NAAAAGTCAACKNN	NNMGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY7_col	0.845	0.695
Q40828_PETCR M11467_2.00	Petroselinum crispum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY_Q2	0.844	0.661
WRKY48 M02565_2.00	Arabidopsis thaliana	NNVGTCADNN	NNHTGACBNN	PBM Weirauch et al.(2014) pTH7552	0.829	0.542
WRKY71 M07374_2.00	Arabidopsis thaliana	HAAAGTCAAMN	NKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY71_col_a	0.827	0.559
WRKY8 M02564_2.00	Arabidopsis thaliana	NRGTCAAHN	NDTTGACYN	PBM Weirauch et al.(2014) pTH7554	0.825	0.559
WRKY8 M07428_2.00	Arabidopsis thaliana	NAAAAGTCAACRNHW	WDNYGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY8_colamp_a	0.825	0.559
WRKY8 M07429_2.00	Arabidopsis thaliana	NNVAAAGTCAACRNH	DNYGTTGACTTTBNN	Dap-seq OMalley et al.(2016) WRKY8_col	0.825	0.559
WRKY28 M07406_2.00	Arabidopsis thaliana	HAAAGTCAAMNNH	DNNKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY28_col_a	0.825	0.542
WRKY28 M07407_2.00	Arabidopsis thaliana	VAAAGTCAAMG	CKTTGACTTTB	Dap-seq OMalley et al.(2016) WRKY28_colamp_a	0.825	0.542
ZAP1 M00982_2.00	Arabidopsis thaliana	NRGTCAAN	NTTGACYN	PBM Lindemose et al.(2014) WRKY1	0.819	0.559
WRKY23 M02556_2.00	Arabidopsis thaliana	RGTCAACG	CGTTGACY	PBM Weirauch et al.(2014) pTH7387	0.813	0.492
WRKY23 M01089_2.00	Arabidopsis thaliana	NRGTCAAM	KTTGACYN	PBM Sullivan et al.(2014) pTH7671	0.813	0.492
fgenesh1_pg.C_Chr_11.0001000193 M02570_2.00	Ostreococcus tauri	NRGTCARNN	NNYTGACYN	PBM Weirauch et al.(2014) pTH9432	0.812	0.458
WRKY57 M02547_2.00	Arabidopsis thaliana	NNRGTCAAHN	NDTTGACYNN	PBM Weirauch et al.(2014) pTH7917	0.809	0.508
For this family, TFs with SR scores > 0.808* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
GLYMA19G40470.1	WRKY	56	114	SDFWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSAKKQVERCRTDASMLIITYTSTHNHP

Links
Other WRKY family TFs
Other *Glycine max* TFs

1782 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
AC198403.3_FG001	Zea mays	AC198403.3_FG001	I
BGIOSGA006249	Oryza indica	BGIOSGA006249	N
BGIOSGA034227	Oryza indica	BGIOSGA034227	I
BRADI3G45997	Brachypodium distachyon	BRADI3G45997	N
BRADI4G21265	Brachypodium distachyon	BRADI4G21265	I
Carubv10012215m.g	Capsella rubella	Carubv10012215m.g	I
F775_17299	Aegilops tauschii	F775_17299	I
GRMZM2G087040	Zea mays	GRMZM2G087040	N
GRMZM2G139740	Zea mays	GRMZM2G139740	N
GSMUA_Achr11G12650_001	Musa acuminata	GSMUA_Achr11G12650_001	N
GSMUA_Achr2G20760_001	Musa acuminata	GSMUA_Achr2G20760_001	I
GSMUA_Achr8G16250_001	Musa acuminata	GSMUA_Achr8G16250_001	I
LPERR02G16700	Leersia perrieri	LPERR02G16700	N
LPERR04G10650	Leersia perrieri	LPERR04G10650	N
LPERR11G07100	Leersia perrieri	LPERR11G07100	I
MLOC_55144	Hordeum vulgare	MLOC_55144	I
OB02G28310	Oryza brachyantha	OB02G28310	N
OB11G16300	Oryza brachyantha	OB11G16300	I
OGLUM02G20980	Oryza glumaepatula	OGLUM02G20980	N
OGLUM11G07800	Oryza glumaepatula	OGLUM11G07800	I
OMERI02G20440	Oryza meridionalis	OMERI02G20440	N
OMERI04G12360	Oryza meridionalis	OMERI04G12360	N
OMERI11G06840	Oryza meridionalis	OMERI11G06840	I
ONIVA02G22690	Oryza nivara	ONIVA02G22690	N
ONIVA04G11950	Oryza nivara	ONIVA04G11950	N
ONIVA11G08160	Oryza nivara	ONIVA11G08160	I
OPUNC02G18630	Oryza punctata	OPUNC02G18630	N
OPUNC04G11630	Oryza punctata	OPUNC04G11630	N
OPUNC11G07750	Oryza punctata	OPUNC11G07750	I
ORGLA04G0108200	Oryza glaberrima	ORGLA04G0108200	N
ORGLA11G0070000	Oryza glaberrima	ORGLA11G0070000	I
ORUFI02G21740	Oryza rufipogon	ORUFI02G21740	N
ORUFI04G15010	Oryza rufipogon	ORUFI04G15010	N
ORUFI11G08240	Oryza rufipogon	ORUFI11G08240	I
OS11G0242300	Oryza sativa	OS11G0242300	I
Pavir.J22217	Panicum virgatum	Pavir.J22217	I
Pavir.J26137	Panicum virgatum	Pavir.J26137	I
SapurV1A.1130s0090	Salix purpurea	SapurV1A.1130s0090	I
SapurV1A.1331s0050	Salix purpurea	SapurV1A.1331s0050	I
Sb04g022943	Sorghum bicolor	Sb04g022943	N
Sb05g007135	Sorghum bicolor	Sb05g007135	I
Si026882m.g	Setaria italica	Si026882m.g	I
Traes_2BL_9CD6E043A	Triticum aestivum	Traes_2BL_9CD6E043A	I
Traes_4AL_D2D7703821	Triticum aestivum	Traes_4AL_D2D7703821	I
Traes_4BS_DD5E68382	Triticum aestivum	Traes_4BS_DD5E68382	I
Traes_4DS_97AC77E13	Triticum aestivum	Traes_4DS_97AC77E13	I
TRIUR3_32168	Triticum urartu	TRIUR3_32168	I
TRIUR3_32331	Triticum urartu	TRIUR3_32331	I

GLYMA19G40470 (Glycine max) WRKY

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1782 Related TFs

GLYMA19G40470 **(Glycine max)
WRKY**