OMERI02G07060 (Oryza meridionalis)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 OMERI02G07060 T353711_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY40
M02548_2.00 		Arabidopsis thaliana
NRGTCAWN
NWTGACYN		 PBM
Weirauch et al.(2014)
pTH8398 		0.861 0.797
WRKY40
M07379_2.00 		Arabidopsis thaliana
NNNAAAGTCAAVR
YBTTGACTTTNNN		 Dap-seq
OMalley et al.(2016)
WRKY40_colamp_a 		0.861 0.797
WRKY40
M07380_2.00 		Arabidopsis thaliana
NNVAAAGTCAAVRNH
DNYBTTGACTTTBNN		 Dap-seq
OMalley et al.(2016)
WRKY40_col 		0.861 0.797
WRKY40
M08180_2.00 		Arabidopsis thaliana
NNAGTCAANN
NNTTGACTNN		 ChIP-seq
Mathelier et al.(2014)
MA1085.2 		0.861 0.797
WRKY60
M02551_2.00 		Arabidopsis thaliana
NYGGTCAAMNN
NNKTTGACCRN		 PBM
Weirauch et al.(2014)
pTH7379 		0.858 0.814
WRKY18
M02560_2.00 		Arabidopsis thaliana
NNRGTCAANN
NNTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7360 		0.855 0.847
WRKY18
M00900_2.00 		Arabidopsis thaliana
NVGTCNN
NNGACBN		 PBM
Franco-Zorrilla et al.(2014)
WRKY18 		0.855 0.847
WRKY18
M07416_2.00 		Arabidopsis thaliana
NNHRGTCAASR
YSTTGACYDNN		 Dap-seq
OMalley et al.(2016)
WRKY18_col_a 		0.855 0.847
WRKY18
M07417_2.00 		Arabidopsis thaliana
NNNHWAGTCAANR
YNTTGACTWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY18_colamp_a 		0.855 0.847
WRKY18
M11465_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRKY18_Q2 		0.855 0.847
WRKY42
M07404_2.00 		Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN
NNDNNHNNNNHGTTGACYWHN		 Dap-seq
OMalley et al.(2016)
WRKY42_col_a 		0.811 0.695
WRKY42
M07405_2.00 		Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD
HHNDNMGTTGACYWNNNHND		 Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a 		0.811 0.695
WRKY6
M07377_2.00 		Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG
CGTTGACYNDNDHNDNNNH		 Dap-seq
OMalley et al.(2016)
WRKY6_col_a 		0.810 0.678
WRKY6
M07378_2.00 		Arabidopsis thaliana
NNHNWRGTCAACKNH
DNMGTTGACYWNDNN		 Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a 		0.810 0.678
WRKY47
M00732_2.00 		Arabidopsis thaliana
NNRGTCAACKN
NMGTTGACYNN		 PBM
Chang et al.(2013)
pTH7913 		0.809 0.695
WRKY47
M07402_2.00 		Arabidopsis thaliana
WRGTCAAMGNHVDK
MHBDNCKTTGACYW		 Dap-seq
OMalley et al.(2016)
WRKY47_col_a 		0.809 0.695
WRKY47
M07403_2.00 		Arabidopsis thaliana
NNNHWRGTCAACKNHNNNN
NNNNDNMGTTGACYWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY47_colamp_a 		0.809 0.695
WRKY31
M07408_2.00 		Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG
CGTTGACYHNNNNNDNNNN		 Dap-seq
OMalley et al.(2016)
WRKY31_col_a 		0.808 0.678
WRKY31
M07409_2.00 		Arabidopsis thaliana
NHWRGTCAACKNH
DNMGTTGACYWDN		 Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a 		0.808 0.678
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI02G07060.1 WRKY 195 253

Links

Other WRKY family TFs
Other Oryza meridionalis TFs

750 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28200.m000189 Ricinus communis 28200.m000189 I
30147.m014211 Ricinus communis 30147.m014211 I
anac032 Vitis vinifera VIT_18s0001g02300 I
Aquca_009_00966 Aquilegia coerulea Aquca_009_00966 I
Aquca_014_00255 Aquilegia coerulea Aquca_014_00255 I
AT3G12910 Arabidopsis thaliana AT3G12910 D
ATAF1 Arabidopsis lyrata scaffold_100066.1 I
BGIOSGA014034 Oryza indica BGIOSGA014034 I
BGIOSGA018048 Oryza indica BGIOSGA018048 I
BGIOSGA027623 Oryza indica BGIOSGA027623 I
BGIOSGA031230 Oryza indica BGIOSGA031230 I
Bo1g138800 Brassica oleracea Bo1g138800 I
Bo2g164090 Brassica oleracea Bo2g164090 I
Bo3g065200 Brassica oleracea Bo3g065200 I
Bo3g107700 Brassica oleracea Bo3g107700 I
Bo5g001100 Brassica oleracea Bo5g001100 I
Bo9g014940 Brassica oleracea Bo9g014940 I
Bo9g036910 Brassica oleracea Bo9g036910 I
Bostr.0568s0569 Boechera stricta Bostr.0568s0569 I
Bostr.3640s0064 Boechera stricta Bostr.3640s0064 I
Bostr.5325s0094 Boechera stricta Bostr.5325s0094 I
Bra010077 Brassica rapa Bra010077 I
Bra029266 Brassica rapa Bra029266 I
Bra033239 Brassica rapa Bra033239 I
Bra034719 Brassica rapa Bra034719 I
Bra039353 Brassica rapa Bra039353 I
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I
Cagra.1968s0112 Capsella grandiflora Cagra.1968s0112 I
Cagra.27691s0001 Capsella grandiflora Cagra.27691s0001 I
Cagra.4003s0027 Capsella grandiflora Cagra.4003s0027 I
Cagra.5641s0055 Capsella grandiflora Cagra.5641s0055 I
Carubv10009926m.g Capsella rubella Carubv10009926m.g I
Carubv10014270m.g Capsella rubella Carubv10014270m.g I
Carubv10026697m.g Capsella rubella Carubv10026697m.g I
cassava28909.valid.m1 Manihot esculenta cassava28909.valid.m1 I
cassava39074.m1 Manihot esculenta cassava39074.m1 I
cassava46384.m1 Manihot esculenta cassava46384.m1 I
cassava47039.m1 Manihot esculenta cassava47039.m1 I
Ca_13571 Cicer arietinum Ca_13571 I
Ciclev10006988m.g Citrus clementina Ciclev10006988m.g I
Cla006372 Citrullus lanatus Cla006372 I
Cla011742 Citrullus lanatus Cla011742 I
Cla023594 Citrullus lanatus Cla023594 I
Cucsa.251620 Cucumis sativus Cucsa.251620 I
Eucgr.A02887 Eucalyptus grandis Eucgr.A02887 I
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I
e_gw1.117.35.1 Physcomitrella patens e_gw1.117.35.1 I
e_gw1.140.53.1 Physcomitrella patens e_gw1.140.53.1 I
e_gw1.164.18.1 Physcomitrella patens e_gw1.164.18.1 I
e_gw1.164.26.1 Physcomitrella patens e_gw1.164.26.1 I
e_gw1.259.4.1 Physcomitrella patens e_gw1.259.4.1 I
e_gw1.5.134.1 Physcomitrella patens e_gw1.5.134.1 I
F775_13961 Aegilops tauschii F775_13961 I
F775_20638 Aegilops tauschii F775_20638 I
F775_30297 Aegilops tauschii F775_30297 I
fgenesh1_pg.scaffold_182000024 Physcomitrella patens fgenesh1_pg.scaffold_182000024 I
fgenesh2_kg.3__1353__AT3G12910.1 Arabidopsis lyrata fgenesh2_kg.3__1353__AT3G12910.1 I
gene21248-v1.0-hybrid Fragaria vesca gene21248-v1.0-hybrid I
GLYMA05G32850 Glycine max GLYMA05G32850 I
GLYMA12G00760 Glycine max GLYMA12G00760 I
GLYMA14G24220 Glycine max GLYMA14G24220 I
Gorai.001G048200 Gossypium raimondii Gorai.001G048200 I
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I
Gorai.006G088400 Gossypium raimondii Gorai.006G088400 I
Gorai.010G051900 Gossypium raimondii Gorai.010G051900 I
Gorai.010G171100 Gossypium raimondii Gorai.010G171100 I
Gorai.010G236700 Gossypium raimondii Gorai.010G236700 I
GRMZM2G052239 Zea mays GRMZM2G052239 I
GRMZM2G167018 Zea mays GRMZM2G167018 I
GSMUA_Achr10G08120_001 Musa acuminata GSMUA_Achr10G08120_001 I
GSMUA_Achr4G32010_001 Musa acuminata GSMUA_Achr4G32010_001 I
GSMUA_Achr6G31580_001 Musa acuminata GSMUA_Achr6G31580_001 I
GSMUA_Achr7G21780_001 Musa acuminata GSMUA_Achr7G21780_001 I
GSMUA_Achr9G10040_001 Musa acuminata GSMUA_Achr9G10040_001 I
gw1.1.690.1 Physcomitrella patens gw1.1.690.1 I
gw1.6.394.1 Physcomitrella patens gw1.6.394.1 I
LPERR09G14720 Leersia perrieri LPERR09G14720 I
LPERR11G01300 Leersia perrieri LPERR11G01300 I
LPERR12G01440 Leersia perrieri LPERR12G01440 I
MDP0000206868 Malus domestica MDP0000206868 I
MDP0000285555 Malus domestica MDP0000285555 I
mgf002365m Mimulus guttatus mgf002365m I
mgf004020m Mimulus guttatus mgf004020m I
mgf013201m Mimulus guttatus mgf013201m I
mgf015836m Mimulus guttatus mgf015836m I
mgf019285m Mimulus guttatus mgf019285m I
mgf021916m Mimulus guttatus mgf021916m I
MLOC_37843 Hordeum vulgare MLOC_37843 I
MTR_1g008740 Medicago truncatula MTR_1g008740 I
MTR_2g068880 Medicago truncatula MTR_2g068880 I
MTR_2g068920 Medicago truncatula MTR_2g068920 I
MTR_8g094580 Medicago truncatula MTR_8g094580 I
NAC002 Arabidopsis thaliana AT1G01720 D
NAC026 Arabidopsis thaliana AT1G62700 I
NAC101 Arabidopsis thaliana AT5G62380 D
OB09G25590 Oryza brachyantha OB09G25590 I
OBART05G16540 Oryza barthii OBART05G16540 I
OGLUM04G30580 Oryza glumaepatula OGLUM04G30580 I
OGLUM05G17550 Oryza glumaepatula OGLUM05G17550 I
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I
OMERI04G25730 Oryza meridionalis OMERI04G25730 I
OMERI05G14410 Oryza meridionalis OMERI05G14410 I
OMERI09G14170 Oryza meridionalis OMERI09G14170 I
ONIVA04G29890 Oryza nivara ONIVA04G29890 I
ONIVA05G17220 Oryza nivara ONIVA05G17220 I
ONIVA08G03440 Oryza nivara ONIVA08G03440 I
ONIVA09G20130 Oryza nivara ONIVA09G20130 I
OPUNC04G28220 Oryza punctata OPUNC04G28220 I
OPUNC05G14600 Oryza punctata OPUNC05G14600 I
orange1.1g018596m.g Citrus sinensis orange1.1g018596m.g I
ORGLA04G0270600 Oryza glaberrima ORGLA04G0270600 I
ORGLA05G0143100 Oryza glaberrima ORGLA05G0143100 I
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I
ORUFI04G32410 Oryza rufipogon ORUFI04G32410 I
ORUFI05G17750 Oryza rufipogon ORUFI05G17750 I
ORUFI08G03870 Oryza rufipogon ORUFI08G03870 I
OS04G0691300 Oryza sativa OS04G0691300 I
OS05G0415400 Oryza sativa OS05G0415400 I
OS08G0157900 Oryza sativa OS08G0157900 I
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I
Pavir.Ib01528 Panicum virgatum Pavir.Ib01528 I
PGSC0003DMG400021576 Solanum tuberosum PGSC0003DMG400021576 I
PGSC0003DMG400029593 Solanum tuberosum PGSC0003DMG400029593 I
PGSC0003DMG400039898 Solanum tuberosum PGSC0003DMG400039898 I
PK26157.1 Cannabis sativa PK26157.1 I
Pm019488 Prunus mume Pm019488 I
Pm019490 Prunus mume Pm019490 I
POPTR_0001s00220 Populus trichocarpa POPTR_0001s00220 I
POPTR_0003s11250 Populus trichocarpa POPTR_0003s11250 I
POPTR_0003s14950 Populus trichocarpa POPTR_0003s14950 I
POPTR_0004s04920 Populus trichocarpa POPTR_0004s04920 I
POPTR_0012s14660 Populus trichocarpa POPTR_0012s14660 I
POPTR_0015s14770 Populus trichocarpa POPTR_0015s14770 I
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I
PRUPE_ppa020139mg Prunus persica PRUPE_ppa020139mg I
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I
SapurV1A.0059s0580 Salix purpurea SapurV1A.0059s0580 I
SapurV1A.0076s0070 Salix purpurea SapurV1A.0076s0070 I
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I
SapurV1A.0129s0210 Salix purpurea SapurV1A.0129s0210 I
SapurV1A.0365s0200 Salix purpurea SapurV1A.0365s0200 I
SapurV1A.0740s0040 Salix purpurea SapurV1A.0740s0040 I
SapurV1A.1275s0070 Salix purpurea SapurV1A.1275s0070 I
SapurV1A.3767s0010 Salix purpurea SapurV1A.3767s0010 I
Sb02g032230 Sorghum bicolor Sb02g032230 I
Sb07g005610 Sorghum bicolor Sb07g005610 I
Sb08g022560 Sorghum bicolor Sb08g022560 I
SELMODRAFT_69090 Selaginella moellendorffii SELMODRAFT_69090 I
SELMODRAFT_71305 Selaginella moellendorffii SELMODRAFT_71305 I
Si022714m.g Setaria italica Si022714m.g I
Si022723m.g Setaria italica Si022723m.g I
Si032702m.g Setaria italica Si032702m.g I
Si036303m.g Setaria italica Si036303m.g I
Solyc06g034340.1 Solanum lycopersicum Solyc06g034340.1 I
Solyc08g074300.2 Solanum lycopersicum Solyc08g074300.2 I
Solyc11g017470.1 Solanum lycopersicum Solyc11g017470.1 I
TCM_014939 Theobroma cacao TCM_014939 I
TCM_016035 Theobroma cacao TCM_016035 I
TCM_029321 Theobroma cacao TCM_029321 I
TCM_035160 Theobroma cacao TCM_035160 I
Thhalv10004488m.g Eutrema salsugineum Thhalv10004488m.g I
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I
Thhalv10021225m.g Eutrema salsugineum Thhalv10021225m.g I
Thhalv10023502m.g Eutrema salsugineum Thhalv10023502m.g I
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I
Traes_7AL_74CC91D39 Triticum aestivum Traes_7AL_74CC91D39 I
Traes_7DL_BDD45DB24 Triticum aestivum Traes_7DL_BDD45DB24 I
TRIUR3_13805 Triticum urartu TRIUR3_13805 I
TRIUR3_29250 Triticum urartu TRIUR3_29250 I
VIT_02s0154g00020 Vitis vinifera VIT_02s0154g00020 I
VIT_16s0022g00690 Vitis vinifera VIT_16s0022g00690 I
VIT_19s0027g00840 Vitis vinifera VIT_19s0027g00840 I
VIT_19s0027g00910 Vitis vinifera VIT_19s0027g00910 I
VND6 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001814 I