SNOG_03490 (Stagonospora nodorum)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 SNOG_03490 T357802_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANIA_01848
M01400_2.00 		Aspergillus nidulans
NVGCGBBWVN
NBWVVCGCBN		 PBM
Lambert et al.(2019)
pEX0279 		0.553 0.718
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SNOT_03490 Zinc cluster 45 83

Links

Other Zinc cluster family TFs
Other Stagonospora nodorum TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29681.m001315 Ricinus communis 29681.m001315 N
Bo2g028290 Brassica oleracea Bo2g028290 I
Bo3g018490 Brassica oleracea Bo3g018490 I
Bostr.20821s0001 Boechera stricta Bostr.20821s0001 N
Bostr.23997s0007 Boechera stricta Bostr.23997s0007 N
Bra006744 Brassica rapa Bra006744 I
Bra020346 Brassica rapa Bra020346 I
Cagra.0891s0081 Capsella grandiflora Cagra.0891s0081 I
Cagra.1398s0045 Capsella grandiflora Cagra.1398s0045 N
Carubv10003695m.g Capsella rubella Carubv10003695m.g N
Carubv10028458m.g Capsella rubella Carubv10028458m.g I
cassava26507.m1 Manihot esculenta cassava26507.m1 N
cassava26674.m1 Manihot esculenta cassava26674.m1 N
chr4.CM0042.120.nd Lotus japonicus chr4.CM0042.120.nd N
Ciclev10030254m.g Citrus clementina Ciclev10030254m.g N
Cla008304 Citrullus lanatus Cla008304 N
Cucsa.146980 Cucumis sativus Cucsa.146980 N
evm.TU.supercontig_112.44 Carica papaya evm.TU.supercontig_112.44 N
fgenesh2_kg.277__1__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.277__1__AT5G58850.1 I
fgenesh2_kg.3__2684__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.3__2684__AT5G58850.1 I
gene08006-v1.0-hybrid Fragaria vesca gene08006-v1.0-hybrid I
GLYMA02G39070 Glycine max GLYMA02G39070 N
GLYMA18G07360 Glycine max GLYMA18G07360 N
Gorai.001G115300 Gossypium raimondii Gorai.001G115300 N
Gorai.011G044100 Gossypium raimondii Gorai.011G044100 N
LjSGA_147332.1 Lotus japonicus LjSGA_147332.1 N
Lus10018220.g Linum usitatissimum Lus10018220.g N
Lus10040684.g Linum usitatissimum Lus10040684.g N
MDP0000319656 Malus domestica MDP0000319656 I
MTR_3g463400 Medicago truncatula MTR_3g463400 N
MTR_5g070020 Medicago truncatula MTR_5g070020 N
MYB64 Arabidopsis lyrata fgenesh2_kg.6__1071__AT5G11050.1 N
MYB64 Arabidopsis thaliana AT5G11050 N
orange1.1g046581m.g Citrus sinensis orange1.1g046581m.g N
PGSC0003DMG400044141 Solanum tuberosum PGSC0003DMG400044141 N
Pm000541 Prunus mume Pm000541 I
POPTR_0001s25710 Populus trichocarpa POPTR_0001s25710 N
POPTR_0009s04870 Populus trichocarpa POPTR_0009s04870 N
PRUPE_ppa018123mg Prunus persica PRUPE_ppa018123mg I
SapurV1A.0772s0150 Salix purpurea SapurV1A.0772s0150 N
Solyc06g076840.1 Solanum lycopersicum Solyc06g076840.1 N
TCM_041651 Theobroma cacao TCM_041651 N
Thhalv10015404m.g Eutrema salsugineum Thhalv10015404m.g N
Thhalv10016057m.g Eutrema salsugineum Thhalv10016057m.g I
Thhalv10027294m.g Eutrema salsugineum Thhalv10027294m.g N