CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HMPREF1541_05887
(
Cyphellophora europaea
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
HMPREF1541_05887
T370946_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU08658
M02628_2.00
Neurospora crassa
NYCGGBWAN
NTWVCCGRN
PBM
Weirauch et al.(2014)
pTH7896
0.542
0.595
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETN39661
Zinc cluster
21
57
VGCLTCRSRRLKCDEARPTCLNCAKSSRECSYLQQAP
Links
Other
Zinc cluster
family TFs
Other
Cyphellophora europaea
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EVEC_0001266201
Enterobius vermicularis
EVEC_0001266201
I
0.000
NECAME_01500
Necator americanus
NECAME_01500
I
0.000
PPA08785
Pristionchus pacificus
PPA08785
I
0.000
PPA10478
Pristionchus pacificus
PPA10478
I
0.000
PTRK_0000018200
Parastrongyloides trichosuri
PTRK_0000018200
N
0.000
RSKR_0000313900
Rhabditophanes kr3021
RSKR_0000313900
N
0.000
scaffold183-EXSNAP2012.18
Pristionchus exspectatus
scaffold183-EXSNAP2012.18
I
0.000
scaffold260-EXSNAP2012.15
Pristionchus exspectatus
scaffold260-EXSNAP2012.15
I
0.000
SMUV_0000801801
Syphacia muris
SMUV_0000801801
I
0.000
SMUV_0000886001
Syphacia muris
SMUV_0000886001
I
0.000
SSTP_0000309200
Strongyloides stercoralis
SSTP_0000309200
N
0.000
SVE_0983600
Strongyloides venezuelensis
SVE_0983600
N
0.000