LACBIDRAFT_317135 (Laccaria bicolor)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 LACBIDRAFT_317135 T372129_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCHCODRAFT_67234
M01419_2.00 		Schizophyllum commune
BATCGGAV
BTCCGATV		 PBM
Lambert et al.(2019)
pTH9776 		0.581 0.781
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDR10563 Zinc cluster 26 59

Links

Other Zinc cluster family TFs
Other Laccaria bicolor TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29613.m000377 Ricinus communis 29613.m000377 I
Aquca_014_00855 Aquilegia coerulea Aquca_014_00855 I
AT2G42040 Arabidopsis thaliana AT2G42040 D
BGIOSGA005516 Oryza indica BGIOSGA005516 I
BGIOSGA022518 Oryza indica BGIOSGA022518 I
Bo3g035920 Brassica oleracea Bo3g035920 I
Bo4g014690 Brassica oleracea Bo4g014690 I
Bo4g191280 Brassica oleracea Bo4g191280 I
Bostr.25993s0574 Boechera stricta Bostr.25993s0574 I
Bra000251 Brassica rapa Bra000251 I
Bra004667 Brassica rapa Bra004667 I
Bra016897 Brassica rapa Bra016897 I
BRADI1G46270 Brachypodium distachyon BRADI1G46270 I
Cagra.13389s0020 Capsella grandiflora Cagra.13389s0020 I
Carubv10023878m.g Capsella rubella Carubv10023878m.g I
Cucsa.242590 Cucumis sativus Cucsa.242590 I
F775_01928 Aegilops tauschii F775_01928 I
fgenesh2_kg.4__2350__AT2G42040.1 Arabidopsis lyrata fgenesh2_kg.4__2350__AT2G42040.1 I
Gorai.002G156300 Gossypium raimondii Gorai.002G156300 I
GRMZM2G033915 Zea mays GRMZM2G033915 I
GRMZM2G134552 Zea mays GRMZM2G134552 N
GRMZM2G165991 Zea mays GRMZM2G165991 I
GSMUA_Achr10G29530_001 Musa acuminata GSMUA_Achr10G29530_001 I
GSMUA_Achr3G07730_001 Musa acuminata GSMUA_Achr3G07730_001 I
GSMUA_Achr3G20210_001 Musa acuminata GSMUA_Achr3G20210_001 I
GSMUA_Achr7G18600_001 Musa acuminata GSMUA_Achr7G18600_001 I
LjT35F01.80.nd Lotus japonicus LjT35F01.80.nd I
LPERR02G28190 Leersia perrieri LPERR02G28190 I
LPERR06G06210 Leersia perrieri LPERR06G06210 I
Lus10004164.g Linum usitatissimum Lus10004164.g I
mgf007626m Mimulus guttatus mgf007626m I
MLOC_17575 Hordeum vulgare MLOC_17575 I
OB06G16230 Oryza brachyantha OB06G16230 I
OBART06G06800 Oryza barthii OBART06G06800 I
OGLUM02G35430 Oryza glumaepatula OGLUM02G35430 I
OGLUM06G07170 Oryza glumaepatula OGLUM06G07170 I
OMERI02G32570 Oryza meridionalis OMERI02G32570 I
OMERI06G07980 Oryza meridionalis OMERI06G07980 I
ONIVA02G36360 Oryza nivara ONIVA02G36360 I
ONIVA06G08110 Oryza nivara ONIVA06G08110 I
OPUNC02G31650 Oryza punctata OPUNC02G31650 I
OPUNC06G06450 Oryza punctata OPUNC06G06450 I
ORGLA02G0296600 Oryza glaberrima ORGLA02G0296600 I
ORGLA06G0063300 Oryza glaberrima ORGLA06G0063300 I
ORUFI02G35820 Oryza rufipogon ORUFI02G35820 I
ORUFI06G07050 Oryza rufipogon ORUFI06G07050 I
OS02G0773600 Oryza sativa OS02G0773600 I
OS06G0207600 Oryza sativa OS06G0207600 I
Pavir.J23833 Panicum virgatum Pavir.J23833 I
Pavir.J25248 Panicum virgatum Pavir.J25248 I
PDK_20s1436981g002 Phoenix dactylifera PDK_20s1436981g002 I
PGSC0003DMG400023669 Solanum tuberosum PGSC0003DMG400023669 I
PK26699.1 Cannabis sativa PK26699.1 I
POPTR_0006s20790 Populus trichocarpa POPTR_0006s20790 I
SapurV1A.0251s0220 Salix purpurea SapurV1A.0251s0220 I
SapurV1A.0251s0230 Salix purpurea SapurV1A.0251s0230 I
SapurV1A.3188s0010 Salix purpurea SapurV1A.3188s0010 I
Sb04g034665 Sorghum bicolor Sb04g034665 N
Sb10g006810 Sorghum bicolor Sb10g006810 I
Solyc10g080530.1 Solanum lycopersicum Solyc10g080530.1 I
Thhalv10017052m.g Eutrema salsugineum Thhalv10017052m.g I
VIT_08s0007g06640 Vitis vinifera VIT_08s0007g06640 I