PAS_FragB_0075 (Komagataella pastoris)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 PAS_FragB_0075 T376945_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GAL4
M01599_2.00 		Saccharomyces cerevisiae
NYCGGVN
NBCCGRN		 PBM
Zhu et al.(2009)
Gal4 		0.540 0.641
GAL4
M07559_2.00 		Saccharomyces cerevisiae
GGANVRCW
WGYBNTCC		 ChIP-exo
Rhee et al.(2011)
Gal4_1 		0.540 0.641
GAL4
M07560_2.00 		Saccharomyces cerevisiae
GGRAAARGGTC
GACCYTTTYCC		 ChIP-exo
Rhee et al.(2011)
Gal4_2 		0.540 0.641
GAL4
M07561_2.00 		Saccharomyces cerevisiae
AGAACAA
TTGTTCT		 ChIP-exo
Rhee et al.(2011)
Gal4_3 		0.540 0.641
GAL4
M08698_2.00 		Saccharomyces cerevisiae
CGGVSNNVTNYNSNCCG
CGGNSNRNABNNSBCCG		 Misc
DeBoer et al.(2011)
YPL248C_1510 		0.540 0.641
GAL4
M11487_2.00 		Saccharomyces cerevisiae
BYWCGGWSVAVWGHBVBCCGDDV
BHHCGGVBVDCWBTBSWCCGWRV		 Transfac
Matys et al.(2006)
F$GAL4_01 		0.540 0.641
GAL4
M11488_2.00 		Saccharomyces cerevisiae
HKYWCGGHVVRVWGHBNBCCGD
HCGGVNVDCWBYBBDCCGWRMD		 Transfac
Matys et al.(2006)
F$GAL4_C 		0.540 0.641
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAY68570 Zinc cluster 42 80

Links

Other Zinc cluster family TFs
Other Komagataella pastoris TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
21336_YPL248C Saccharomyces mikatae 21336_YPL248C I 0.540
21920_YPL248C Saccharomyces paradoxus 21920_YPL248C I 0.540
24374_YPL248C Saccharomyces bayanus 24374_YPL248C I 0.557
AWRI1499_3090 Brettanomyces bruxellensis AWRI1499_3090 I 0.607
CANTEDRAFT_103981 Candida tenuis CANTEDRAFT_103981 I 0.598
CANTEDRAFT_110774 Candida tenuis CANTEDRAFT_110774 N 0.549
CaO19.12798 Candida albicans CaO19.12798 N 0.588
CaO19.5338 Candida albicans CaO19.5338 N 0.588
CD36_24740 Candida dubliniensis CD36_24740 N 0.588
CLUG_00203 Clavispora lusitaniae CLUG_00203 I 0.612
CLUG_00203 Candida lusitaniae CLUG_00203 I 0.612
CORT_0C07270 Candida orthopsilosis CORT_0C07270 N 0.604
CPAG_02485 Candida parapsilosis CPAG_02485 N 0.604
CTRG_01928 Candida tropicalis CTRG_01928 N 0.573
DEHA2C11418g Debaryomyces hansenii DEHA2C11418g N 0.560
DEHA2F03366g Debaryomyces hansenii DEHA2F03366g I 0.611
G210_5810 Candida maltosa G210_5810 N 0.589
GAL4 Saccharomyces cerevisiae YPL248C D 0.540
GNLVRS01_PISO0E01698g Millerozyma farinosa GNLVRS01_PISO0E01698g N 0.552
GNLVRS01_PISO0F02711g Millerozyma farinosa GNLVRS01_PISO0F02711g I 0.612
GNLVRS01_PISO0I01526g Millerozyma farinosa GNLVRS01_PISO0I01526g N 0.552
GNLVRS01_PISO0J02671g Millerozyma farinosa GNLVRS01_PISO0J02671g I 0.612
gwh1.6.1.1306.1 Pichia stipitis gwh1.6.1.1306.1 N 0.586
JL09_g5364 Pichia kudriavzevii JL09_g5364 N 0.588
KUCA_T00003059001 Kuraishia capsulata KUCA_T00003059001 N 0.573
LELG_02329 Lodderomyces elongisporus LELG_02329 N 0.604
NCAS_0G01100 Naumovozyma castellii NCAS_0G01100 I 0.540
PGUG_04835 Meyerozyma guilliermondii PGUG_04835 I 0.586
PGUG_04835 Candida guilliermondii PGUG_04835 I 0.586
PICST_46395 Scheffersomyces stipitis PICST_46395 N 0.549
PICST_9952 Scheffersomyces stipitis PICST_9952 N 0.586
SAKL0A02860g Lachancea kluyveri SAKL0A02860g I 0.587
Scas_Contig699.7 Saccharomyces castellii Scas_Contig699.7 I 0.540
SPAPADRAFT_137810 Spathaspora passalidarum SPAPADRAFT_137810 N 0.586
TBLA_0G01800 Tetrapisispora blattae TBLA_0G01800 I 0.556
TPHA_0H01980 Tetrapisispora phaffii TPHA_0H01980 I 0.556
XP_002490850.1 Pichia pastoris XP_002490850.1 I 0.683
ZBAI_04658 Zygosaccharomyces bailii ZBAI_04658 I 0.581
ZBAI_06699 Zygosaccharomyces bailii ZBAI_06699 I 0.581