VDBG_01161 (Verticillium alfalfae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 VDBG_01161 T387450_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANIA_06846
M01390_2.00 		Aspergillus nidulans
VTCGGYTA
TARCCGAB		 PBM
Lambert et al.(2019)
pEX0258 		0.540 0.457
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEY15052 Zinc cluster 31 65

Links

Other Zinc cluster family TFs
Other Verticillium alfalfae TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG01395 Caenorhabditis briggsae CBG01395 N 0.000
CBG03687 Caenorhabditis briggsae CBG03687 I 0.000
CBG12152 Caenorhabditis briggsae CBG12152 I 0.000
CBN03769 Caenorhabditis brenneri CBN03769 I 0.000
CBN04619 Caenorhabditis brenneri CBN04619 I 0.000
CBN16902 Caenorhabditis brenneri CBN16902 I 0.000
CBN24070 Caenorhabditis brenneri CBN24070 I 0.000
CJA04414 Caenorhabditis japonica CJA04414 I 0.000
CJA07390 Caenorhabditis japonica CJA07390 I 0.000
CRE17310 Caenorhabditis remanei CRE17310 I 0.000
CRE17354 Caenorhabditis remanei CRE17354 I 0.000
CRE17355 Caenorhabditis remanei CRE17355 I 0.000
CRE18529 Caenorhabditis remanei CRE18529 I 0.000
CRE27174 Caenorhabditis remanei CRE27174 I 0.000
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.000
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.000
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.000
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.000
PPA29361 Pristionchus pacificus PPA29361 I 0.000