13522_YKL038W (Saccharomyces mikatae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 13522_YKL038W T390753_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RGT1
M00092_2.00 		Saccharomyces cerevisiae
CGGRDNWWHN
NDWWNHYCCG		 PBM
Badis et al.(2008)
RGT1_2131 		0.666 0.925
RGT1
M01585_2.00 		Saccharomyces cerevisiae
HCGGADNWWN
NWWNHTCCGD		 PBM
Zhu et al.(2009)
Rgt1 		0.666 0.925
RGT1
M07518_2.00 		Saccharomyces cerevisiae
NCGGADNAWHN
NDWTNHTCCGN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0367.1 		0.666 0.925
RGT1
M08673_2.00 		Saccharomyces cerevisiae
NDNNNYCGGAWWAAYHNNNN
NNNNDRTTWWTCCGRNNNHN		 Misc
DeBoer et al.(2011)
YKL038W_803 		0.666 0.925
RGT1
M11480_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RGT1_Q5 		0.666 0.925
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
13522_YKL038W Zinc cluster 45 86

Links

Other Zinc cluster family TFs
Other Saccharomyces mikatae TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0000571401 Angiostrongylus costaricensis ACOC_0000571401 N 0.000
ANCCAN_18250 Ancylostoma caninum ANCCAN_18250 N 0.000
ANCCEY_02118 Ancylostoma ceylanicum ANCCEY_02118 N 0.000
ANCDUO_05680 Ancylostoma duodenale ANCDUO_05680 N 0.000
ASU_12051 Ascaris suum ASU_12051 N 0.000
Bm4897 Brugia malayi Bm4897 N 0.000
CRE16913 Caenorhabditis remanei CRE16913 N 0.000
CRE27979 Caenorhabditis remanei CRE27979 N 0.000
DICVIV_03671 Dictyocaulus viviparus DICVIV_03671 N 0.000
Hba_17078 Heterorhabditis bacteriophora Hba_17078 N 0.000
lag-1 Caenorhabditis elegans WBGene00002245 N 0.000
NBR_0000281601 Nippostrongylus brasiliensis NBR_0000281601 N 0.000
nDi.2.2.2.g05496 Dirofilaria immitis nDi.2.2.2.g05496 N 0.000
NECAME_18743 Necator americanus NECAME_18743 N 0.000
nLs.2.1.2.g01496 Litomosoides sigmodontis nLs.2.1.2.g01496 N 0.000
nOo.2.0.1.g00014 Onchocerca ochengi nOo.2.0.1.g00014 N 0.000
OESDEN_00868 Oesophagostomum dentatum OESDEN_00868 N 0.000
Ppa-lag-1 Pristionchus pacificus PPA16712 N 0.000
SPAL_0001149300 Strongyloides papillosus SPAL_0001149300 N 0.000
SSTP_0000504800 Strongyloides stercoralis SSTP_0000504800 N 0.000
SVE_1985500 Strongyloides venezuelensis SVE_1985500 N 0.000
SVUK_0001898701 Strongylus vulgaris SVUK_0001898701 N 0.000
TCLT_0000154801 Thelazia callipaeda TCLT_0000154801 N 0.000
TELCIR_20071 Teladorsagia circumcincta TELCIR_20071 N 0.000
WBGene00242124 Onchocerca volvulus WBGene00242124 N 0.000
WUBG_04020 Wuchereria bancrofti WUBG_04020 N 0.000