AMTR_s00107p00095070 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00107p00095070 T000390_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G65130
M06686_2.00 		Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR		 Dap-seq
OMalley et al.(2016)
At5g65130_col_a 		0.716 0.760
AT5G65130
M06687_2.00 		Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN		 Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a 		0.716 0.760
ERF054
M06647_2.00 		Arabidopsis thaliana
NNNNNNNNNHHDSCRCCGHC
GDCGGYGSHDDNNNNNNNNN		 Dap-seq
OMalley et al.(2016)
At4g28140_col_a 		0.698 0.780
ERF054
M06648_2.00 		Arabidopsis thaliana
NNNNHDBCRCCGHCM
KGDCGGYGVHDNNNN		 Dap-seq
OMalley et al.(2016)
At4g28140_colamp_a 		0.698 0.780
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.684 0.800
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.678 0.800
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.678 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN00300 AP2 137 188

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g05276 Acanthocheilonema viteae nAv.1.0.1.g05276 I
AAEL000869 Aedes aegypti AAEL000869 I
ACAC_0000515301 Angiostrongylus cantonensis ACAC_0000515301 I
AATE011452 Anopheles atroparvus AATE011452 I
ACOM022805 Anopheles coluzzii ACOM022805 I
ADIR005637 Anopheles dirus ADIR005637 I
AFAF000823 Anopheles farauti AFAF000823 I
AGAP010926 Anopheles gambiae AGAP010926 I
AMEC011115 Anopheles melas AMEC011115 I
AMEM009379 Anopheles merus AMEM009379 I
ASTEI06414 Anopheles stephensi ASTEI06414 I
GB48486 Apis mellifera GB48486 I
ENSAMXG00000016347 Astyanax mexicanus ENSAMXG00000016347 I
BGIBMGA003190 Bombyx mori BGIBMGA003190 I
Bm9493 Brugia malayi Bm9493 I
BTMF_0000951801 Brugia timori BTMF_0000951801 N
BXY_1436800 Bursaphelenchus xylophilus BXY_1436800 I
GFI1B Callithrix jacchus ENSCJAG00000018071 I
Cflo_04170--XP_001120914.1_APIME Camponotus floridanus Cflo_04170--XP_001120914.1_APIME I
CGI_10001094 Crassostrea gigas CGI_10001094 I
KGM_22443 Danaus plexippus KGM_22443 I
DILT_0000061901 Diphyllobothrium latum DILT_0000061901 I
nDi.2.2.2.g08859 Dirofilaria immitis nDi.2.2.2.g08859 N
GF10411 Drosophila ananassae FBgn0087452 I
GG13774 Drosophila erecta FBgn0106037 I
GH16734 Drosophila grimshawi FBgn0124205 I
sens Drosophila melanogaster FBgn0002573 D
GI13460 Drosophila mojavensis FBgn0136216 I
GL15695 Drosophila persimilis FBgn0153299 I
GA28112 Drosophila pseudoobscura FBgn0249475 I
GA16696 Drosophila pseudoobscura FBgn0076711 I
GM24598 Drosophila sechellia FBgn0179461 I
GD12667 Drosophila simulans FBgn0184394 I
GJ11823 Drosophila virilis FBgn0199077 I
GK12454 Drosophila willistoni FBgn0214464 I
GE20069 Drosophila yakuba FBgn0237393 I
EEL_0000225901 Elaeophora elaphi EEL_0000225901 N
HCOI00212900 Haemonchus contortus HCOI00212900 I
HMEL012459 Heliconius melpomene HMEL012459 I
HelroG67579 Helobdella robusta HelroG67579 I
HelroG145685 Helobdella robusta HelroG145685 I
HelroG145534 Helobdella robusta HelroG145534 I
GFI1B Homo sapiens ENSG00000165702 D
LOAG_13079 Loa loa LOAG_13079 N
LotgiG98465 Lottia gigantea LotgiG98465 I
LCUP007432 Lucilia cuprina LCUP007432 I
LLOJ009104 Lutzomyia longipalpis LLOJ009104 I
GFI1B Macaca mulatta ENSMMUG00000005948 I
MESCA000812 Megaselia scalaris MESCA000812 I
MhA1_Contig1061.frz3.gene12 Meloidogyne hapla MhA1_Contig1061.frz3.gene12 I
MDOA006012 Musca domestica MDOA006012 I
NV16026 Nasonia vitripennis NV16026 I
GFI1B Ochotona princeps ENSOPRG00000000125 I
WBGene00240177 Onchocerca volvulus WBGene00240177 N
ENSPTRG00000000961 Pan troglodytes ENSPTRG00000000961 I
PTRK_0000195600 Parastrongyloides trichosuri PTRK_0000195600 I
PHUM248190 Pediculus humanus PHUM248190 I
GFI1 Procavia capensis ENSPCAG00000011020 I
PXEA_0001261301 Protopolystoma xenopodis PXEA_0001261301 I
RSKR_0000656700 Rhabditophanes kr3021 RSKR_0000656700 I
SSLN_0000272801 Schistocephalus solidus SSLN_0000272801 I
SPAL_0000614400 Strongyloides papillosus SPAL_0000614400 I
SSTP_0000165900 Strongyloides stercoralis SSTP_0000165900 I
SVE_0901200 Strongyloides venezuelensis SVE_0901200 I
gfi1b Takifugu rubripes ENSTRUG00000004525 I
TC013474 Tribolium castaneum TC013474 I
WUBG_13248 Wuchereria bancrofti WUBG_13248 I
L798_01833 Zootermopsis nevadensis L798_01833 I