GLYMA06G40011 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA06G40011 T001817_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF4_TOBAC
M09728_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_02 		0.739 0.860
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.731 0.820
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.731 0.820
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.728 0.860
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.728 0.860
ERF4
M01616_2.00 		Arabidopsis thaliana
VCGCCGCC
GGCGGCGB		 PBM
Weirauch et al.(2014)
pTH8156 		0.695 0.780
ERF4
M06616_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRHHD
HDDYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF4_col_a 		0.695 0.780
ERF4
M06617_2.00 		Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN
NNHDDYGRCGGCGSNDNNDN		 Dap-seq
OMalley et al.(2016)
ERF4_colamp_a 		0.695 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA06G40011.1 AP2 2 53

Links

Other AP2 family TFs
Other Glycine max TFs

170 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC091 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6001968 N
NAC091 Arabidopsis thaliana AT5G24590 N
Bo3g109540 Brassica oleracea Bo3g109540 I
Cagra.21346s0001 Capsella grandiflora Cagra.21346s0001 N
Carubv10000892m.g Capsella rubella Carubv10000892m.g N
evm.TU.supercontig_3.170 Carica papaya evm.TU.supercontig_3.170 N
Cla002432 Citrullus lanatus Cla002432 N
Ciclev10019368m.g Citrus clementina Ciclev10019368m.g N
orange1.1g007393m.g Citrus sinensis orange1.1g007393m.g N
Cucsa.273280 Cucumis sativus Cucsa.273280 N
Thhalv10004105m.g Eutrema salsugineum Thhalv10004105m.g N
GLYMA04G40450 Glycine max GLYMA04G40450 N
GLYMA02G38710 Glycine max GLYMA02G38710 N
Gorai.003G073300 Gossypium raimondii Gorai.003G073300 I
Gorai.006G203800 Gossypium raimondii Gorai.006G203800 I
Gorai.004G125900 Gossypium raimondii Gorai.004G125900 I
Lus10015587.g Linum usitatissimum Lus10015587.g I
Lus10032919.g Linum usitatissimum Lus10032919.g I
cassava11768.valid.m1 Manihot esculenta cassava11768.valid.m1 N
MTR_3g093040 Medicago truncatula MTR_3g093040 N
POPTR_0015s00640 Populus trichocarpa POPTR_0015s00640 N
POPTR_0012s00760 Populus trichocarpa POPTR_0012s00760 N
SapurV1A.0285s0090 Salix purpurea SapurV1A.0285s0090 I
SapurV1A.0326s0320 Salix purpurea SapurV1A.0326s0320 N
SapurV1A.0662s0040 Salix purpurea SapurV1A.0662s0040 N
SapurV1A.0666s0060 Salix purpurea SapurV1A.0666s0060 N
SapurV1A.2735s0030 Salix purpurea SapurV1A.2735s0030 N
TCM_015535 Theobroma cacao TCM_015535 I
VIT_16s0098g00760 Vitis vinifera VIT_16s0098g00760 I