OGLUM02G35980 (Oryza glumaepatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OGLUM02G35980 T003215_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.724 0.840
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.724 0.840
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.718 0.820
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.718 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM02G35980.1 AP2 16 67

Links

Other AP2 family TFs
Other Oryza glumaepatula TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_015_00469 Aquilegia coerulea Aquca_015_00469 N
anac036 Arabidopsis thaliana AT2G17040 N
Bostr.18351s0165 Boechera stricta Bostr.18351s0165 N
Bo3g092020 Brassica oleracea Bo3g092020 N
Bo7g015050 Brassica oleracea Bo7g015050 N
Bo9g024360 Brassica oleracea Bo9g024360 N
Bra002018 Brassica rapa Bra002018 N
Bra013034 Brassica rapa Bra013034 N
Bra037283 Brassica rapa Bra037283 N
Cagra.0805s0005 Capsella grandiflora Cagra.0805s0005 N
Carubv10014350m.g Capsella rubella Carubv10014350m.g N
evm.TU.supercontig_320.2 Carica papaya evm.TU.supercontig_320.2 N
Ca_11128 Cicer arietinum Ca_11128 N
Cla007018 Citrullus lanatus Cla007018 N
Ciclev10029007m.g Citrus clementina Ciclev10029007m.g N
orange1.1g023427m.g Citrus sinensis orange1.1g023427m.g N
Cucsa.119310 Cucumis sativus Cucsa.119310 N
Eucgr.I01494 Eucalyptus grandis Eucgr.I01494 N
Thhalv10022800m.g Eutrema salsugineum Thhalv10022800m.g N
gene17203-v1.0-hybrid Fragaria vesca gene17203-v1.0-hybrid N
GLYMA11G10230 Glycine max GLYMA11G10230 N
GLYMA12G02540 Glycine max GLYMA12G02540 N
Gorai.008G038800 Gossypium raimondii Gorai.008G038800 N
Gorai.005G257800 Gossypium raimondii Gorai.005G257800 N
Gorai.003G003900 Gossypium raimondii Gorai.003G003900 N
Gorai.002G001900 Gossypium raimondii Gorai.002G001900 N
Lus10022636.g Linum usitatissimum Lus10022636.g N
Lus10003333.g Linum usitatissimum Lus10003333.g N
chr3.CM0460.350.nd Lotus japonicus chr3.CM0460.350.nd N
MDP0000480581 Malus domestica MDP0000480581 N
MDP0000868556 Malus domestica MDP0000868556 N
cassava30341.valid.m1 Manihot esculenta cassava30341.valid.m1 N
cassava13355.valid.m1 Manihot esculenta cassava13355.valid.m1 N
MTR_4g075980 Medicago truncatula MTR_4g075980 N
mgf013168m Mimulus guttatus mgf013168m N
POPTR_0004s18860 Populus trichocarpa POPTR_0004s18860 N
POPTR_0009s14370 Populus trichocarpa POPTR_0009s14370 N
Pm020961 Prunus mume Pm020961 N
PRUPE_ppa009455mg Prunus persica PRUPE_ppa009455mg N
29830.m001415 Ricinus communis 29830.m001415 N
29797.m000353 Ricinus communis 29797.m000353 N
SapurV1A.0080s0480 Salix purpurea SapurV1A.0080s0480 N
SapurV1A.0218s0020 Salix purpurea SapurV1A.0218s0020 N
TCM_006499 Theobroma cacao TCM_006499 N
VIT_04s0008g00150 Vitis vinifera VIT_04s0008g00150 N