ONIVA01G04630 (Oryza nivara)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ONIVA01G04630 T003522_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.766 0.898
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.751 0.918
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.684 0.816
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.681 0.816
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.679 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA01G04630.1 AP2 74 125
ONIVA01G04630.2 AP2 74 125
ONIVA01G04630.3 AP2 74 125
ONIVA01G04630.4 AP2 74 125
ONIVA01G04630.5 AP2 84 135

Links

Other AP2 family TFs
Other Oryza nivara TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aqu1.223566 Amphimedon queenslandica Aqu1.223566 N
ENSACAG00000027602 Anolis carolinensis ENSACAG00000027602 I
TCF3 Callithrix jacchus ENSCJAG00000004642 I
Cmyd_10006705 Chelonia mydas Cmyd_10006705 I
TCF3 Felis catus ENSFCAG00000023514 I
TCF3 Gallus gallus ENSGALG00000001093 I
tcf3a Gasterosteus aculeatus ENSGACG00000015282 I
TCF3 Gorilla gorilla ENSGGOG00000003667 I
HelroG76917 Helobdella robusta HelroG76917 N
TCF3 Homo sapiens ENSG00000071564 D
TCF3 Macaca mulatta ENSMMUG00000009017 I
TCF3 Meleagris gallopavo ENSMGAG00000002388 I
SNAPOd2T00003591001 Oikopleura dioica SNAPOd2T00003591001 I
Ogr01317 Ophisaurus gracilis Ogr01317 I
ENSPANG00000016063 Papio anubis ENSPANG00000016063 I
ENSPFOG00000015977 Poecilia formosa ENSPFOG00000015977 N
ENSPFOG00000013466 Poecilia formosa ENSPFOG00000013466 N
SMAR008523 Strigamia maritima SMAR008523 I
ENSTRUG00000002569 Takifugu rubripes ENSTRUG00000002569 I
tcf3a Takifugu rubripes ENSTRUG00000008147 I
tcf12 Takifugu rubripes ENSTRUG00000017855 I
tetur02g08700 Tetranychus urticae tetur02g08700 I
ENSTNIG00000010330 Tetraodon nigroviridis ENSTNIG00000010330 I
tcf12 Tetraodon nigroviridis ENSTNIG00000009326 I
TMUE_s0043005200 Trichuris muris TMUE_s0043005200 I
D918_01871 Trichuris suis D918_01871 I
TTRE_0000494001 Trichuris trichiura TTRE_0000494001 I
tcf3 Xenopus tropicalis XB-GENE-478265 I
ENSXMAG00000019314 Xiphophorus maculatus ENSXMAG00000019314 N