ORGLA01G0061000 (Oryza glaberrima)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ORGLA01G0061000 T003834_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q8LKX0_MAIZE
M09722_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DBF2_01 		0.765 0.880
ERF043
M01627_2.00 		Arabidopsis thaliana
YRCCGACA
TGTCGGYR		 PBM
Weirauch et al.(2014)
pTH7413 		0.731 0.860
ERF043
M06651_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNN
NNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a 		0.731 0.860
ERF043
M06652_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNH
DNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_col 		0.731 0.860
ERF035
M06631_2.00 		Arabidopsis thaliana
YCACCGACANWDNH
DNHWNTGTCGGTGR		 Dap-seq
OMalley et al.(2016)
AT3G60490_col_a 		0.730 0.860
ERF035
M06632_2.00 		Arabidopsis thaliana
NNBCACCGACAHWNNN
NNNWDTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a 		0.730 0.860
ERF034
M06614_2.00 		Arabidopsis thaliana
NHNYCACCGACANHD
HDNTGTCGGTGRNDN		 Dap-seq
OMalley et al.(2016)
At2g44940_col_a 		0.729 0.860
ERF034
M06615_2.00 		Arabidopsis thaliana
NDBCACCGACANH
DNTGTCGGTGVHN		 Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a 		0.729 0.860
ERF037
M00843_2.00 		Arabidopsis thaliana
NRCCGACRN
NYGTCGGYN		 PBM
Franco-Zorrilla et al.(2014)
At1g77200 		0.683 0.840
ERF037
M06599_2.00 		Arabidopsis thaliana
YCRCCGACAHHNNH
DNNDDTGTCGGYGR		 Dap-seq
OMalley et al.(2016)
AT1G77200_col_a 		0.683 0.840
ERF037
M06600_2.00 		Arabidopsis thaliana
NNYACCGACAHN
NDTGTCGGTRNN		 Dap-seq
OMalley et al.(2016)
AT1G77200_colamp_a 		0.683 0.840
Q5MAR7_BRANA
M09742_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII1_01 		0.680 0.840
Q3HS44_BRANA
M09741_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII2_01 		0.680 0.840
Q3HS43_BRANA
M09740_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII3_01 		0.680 0.840
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA01G0061000.1 AP2 44 95

Links

Other AP2 family TFs
Other Oryza glaberrima TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
anac047 Arabidopsis lyrata fgenesh2_kg.3__367__AT3G04070.1 I
NAM Arabidopsis lyrata fgenesh2_kg.1__4366__AT1G52880.1 I
NAC047 Arabidopsis thaliana AT3G04070 D
NAC018 Arabidopsis thaliana AT1G52880 D
Bostr.0124s0081 Boechera stricta Bostr.0124s0081 I
Bostr.2570s0301 Boechera stricta Bostr.2570s0301 I
Bo5g148420 Brassica oleracea Bo5g148420 I
Bo3g066880 Brassica oleracea Bo3g066880 I
Bo1g152220 Brassica oleracea Bo1g152220 I
Bo1g128420 Brassica oleracea Bo1g128420 I
Bo1g048300 Brassica oleracea Bo1g048300 I
Bra001597 Brassica rapa Bra001597 I
Bra021114 Brassica rapa Bra021114 I
Bra026353 Brassica rapa Bra026353 I
Bra031949 Brassica rapa Bra031949 I
Bra040152 Brassica rapa Bra040152 I
PK06287.1 Cannabis sativa PK06287.1 N
Cagra.2026s0001 Capsella grandiflora Cagra.2026s0001 I
Cagra.0946s0024 Capsella grandiflora Cagra.0946s0024 I
Carubv10014000m.g Capsella rubella Carubv10014000m.g I
Carubv10009524m.g Capsella rubella Carubv10009524m.g I
Ciclev10020717m.g Citrus clementina Ciclev10020717m.g I
orange1.1g017665m.g Citrus sinensis orange1.1g017665m.g I
Eucgr.K01471 Eucalyptus grandis Eucgr.K01471 N
Eucgr.A02070 Eucalyptus grandis Eucgr.A02070 I
Thhalv10021011m.g Eutrema salsugineum Thhalv10021011m.g I
GLYMA06G38440 Glycine max GLYMA06G38440 I
GLYMA16G26740 Glycine max GLYMA16G26740 I
GLYMA12G22790 Glycine max GLYMA12G22790 I
GLYMA16G04740 Glycine max GLYMA16G04740 I
GLYMA19G28476 Glycine max GLYMA19G28476 I
Gorai.013G191800 Gossypium raimondii Gorai.013G191800 I
Gorai.007G267900 Gossypium raimondii Gorai.007G267900 I
LPERR03G13950 Leersia perrieri LPERR03G13950 I
Lus10042531.g Linum usitatissimum Lus10042531.g I
Lus10018469.g Linum usitatissimum Lus10018469.g I
Lus10011215.g Linum usitatissimum Lus10011215.g I
Lus10006547.g Linum usitatissimum Lus10006547.g I
Lus10003269.g Linum usitatissimum Lus10003269.g I
MDP0000674514 Malus domestica MDP0000674514 I
MDP0000404409 Malus domestica MDP0000404409 I
MDP0000180683 Malus domestica MDP0000180683 I
cassava35701.valid.m1 Manihot esculenta cassava35701.valid.m1 I
cassava22631.valid.m1 Manihot esculenta cassava22631.valid.m1 I
mgf001766m Mimulus guttatus mgf001766m I
OB03G25680 Oryza brachyantha OB03G25680 I
OPUNC07G25060 Oryza punctata OPUNC07G25060 I
POPTR_0013s05080 Populus trichocarpa POPTR_0013s05080 I
Pm025312 Prunus mume Pm025312 I
PRUPE_ppa007445mg Prunus persica PRUPE_ppa007445mg I
29950.m001173 Ricinus communis 29950.m001173 I
30078.m002348 Ricinus communis 30078.m002348 I
SapurV1A.0867s0160 Salix purpurea SapurV1A.0867s0160 I
SapurV1A.1058s0080 Salix purpurea SapurV1A.1058s0080 I
SapurV1A.1196s0040 Salix purpurea SapurV1A.1196s0040 I
SapurV1A.2115s0010 Salix purpurea SapurV1A.2115s0010 I
Sb01g036560 Sorghum bicolor Sb01g036560 I
TCM_026030 Theobroma cacao TCM_026030 I
anac047 Vitis vinifera VIT_08s0007g07670 I
GRMZM2G042494 Zea mays GRMZM2G042494 I
GRMZM2G011598 Zea mays GRMZM2G011598 I