CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SELMODRAFT_73159
(
Selaginella moellendorffii
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
SELMODRAFT_73159
T005213_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
estExt_fgenesh1_pg.C_4800009
M01639_2.00
Physcomitrella patens
MACCGACM
KGTCGGTK
PBM
Weirauch et al.(2014)
pTH8488
0.716
0.854
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFJ31024
AP2
1
50
YKGVRKRSWGKYVSEIREPNKRSRIWLGSFETPEMAARAYDAAVLCLRGA
Links
Other
AP2
family TFs
Other
Selaginella moellendorffii
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_pg.C_4800009
Physcomitrella patens
estExt_fgenesh1_pg.C_4800009
D
0.716
gw1.117.121.1
Physcomitrella patens
gw1.117.121.1
I
0.677
gw1.14.214.1
Physcomitrella patens
gw1.14.214.1
I
0.683
gw1.15.199.1
Physcomitrella patens
gw1.15.199.1
I
0.680
gw1.155.87.1
Physcomitrella patens
gw1.155.87.1
I
0.712
gw1.276.83.1
Physcomitrella patens
gw1.276.83.1
I
0.677
SELMODRAFT_73146
Selaginella moellendorffii
SELMODRAFT_73146
I
0.790
SELMODRAFT_73147
Selaginella moellendorffii
SELMODRAFT_73147
N
0.678
SELMODRAFT_73148
Selaginella moellendorffii
SELMODRAFT_73148
N
0.678
SELMODRAFT_73150
Selaginella moellendorffii
SELMODRAFT_73150
I
0.718
SELMODRAFT_73157
Selaginella moellendorffii
SELMODRAFT_73157
I
0.718