CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pm020315
(
Prunus mume
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Pm020315
T006619_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm020315
AP2
106
154
CLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAARLYDRAAFMCGRE
Links
Other
AP2
family TFs
Other
Prunus mume
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_06135
Aegilops tauschii
F775_06135
N
0.000
fgenesh2_kg.3__2134__AT3G19184.1
Arabidopsis lyrata
fgenesh2_kg.3__2134__AT3G19184.1
N
0.000
AT3G19184
Arabidopsis thaliana
AT3G19184
N
0.000
Bostr.19424s0744
Boechera stricta
Bostr.19424s0744
N
0.000
BRADI1G45517
Brachypodium distachyon
BRADI1G45517
N
0.000
Bra035129
Brassica rapa
Bra035129
N
0.000
PK25650.1
Cannabis sativa
PK25650.1
N
0.000
Cagra.5742s0010
Capsella grandiflora
Cagra.5742s0010
N
0.000
Carubv10014420m.g
Capsella rubella
Carubv10014420m.g
N
0.000
evm.TU.supercontig_62.23
Carica papaya
evm.TU.supercontig_62.23
N
0.000
Cla016258
Citrullus lanatus
Cla016258
N
0.000
Ciclev10029072m.g
Citrus clementina
Ciclev10029072m.g
N
0.000
Ciclev10002314m.g
Citrus clementina
Ciclev10002314m.g
N
0.000
orange1.1g036915m.g
Citrus sinensis
orange1.1g036915m.g
N
0.000
orange1.1g026276m.g
Citrus sinensis
orange1.1g026276m.g
N
0.000
Cucsa.219930
Cucumis sativus
Cucsa.219930
N
0.000
Thhalv10019015m.g
Eutrema salsugineum
Thhalv10019015m.g
N
0.000
Gorai.013G042700
Gossypium raimondii
Gorai.013G042700
N
0.000
Gorai.002G131600
Gossypium raimondii
Gorai.002G131600
N
0.000
LPERR06G05590
Leersia perrieri
LPERR06G05590
N
0.000
Lus10014044.g
Linum usitatissimum
Lus10014044.g
N
0.000
Lus10019870.g
Linum usitatissimum
Lus10019870.g
N
0.000
mgf008645m
Mimulus guttatus
mgf008645m
N
0.000
POPTR_0009s10590
Populus trichocarpa
POPTR_0009s10590
N
0.000
PRUPE_ppb024440mg
Prunus persica
PRUPE_ppb024440mg
N
0.000
29801.m003200
Ricinus communis
29801.m003200
N
0.000
SapurV1A.0090s0770
Salix purpurea
SapurV1A.0090s0770
N
0.000
Solyc01g108140.2
Solanum lycopersicum
Solyc01g108140.2
N
0.000
PGSC0003DMG400025792
Solanum tuberosum
PGSC0003DMG400025792
N
0.000
Sb07g006170
Sorghum bicolor
Sb07g006170
N
0.000
Traes_7DS_A234A13E1
Triticum aestivum
Traes_7DS_A234A13E1
N
0.000
Traes_7BS_9D1E05CB7
Triticum aestivum
Traes_7BS_9D1E05CB7
N
0.000