Pavir.Ha00304 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.Ha00304 T009487_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF094
M01602_2.00 		Arabidopsis thaliana
VGCCGCCD
HGGCGGCB		 PBM
Weirauch et al.(2014)
pTH8276 		0.743 0.784
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ha00304.1.p AP2 33 84

Links

Other AP2 family TFs
Other Panicum virgatum TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG007907.1 Alligator sinensis Alligator_sinensis_CCG007907.1 N
ENSAMXG00000014832 Astyanax mexicanus ENSAMXG00000014832 N
ENSBTAP00000049034-D1 Bos grunniens ENSBTAP00000049034-D1 N
ENSBTAP00000049357-D1 Bos grunniens ENSBTAP00000049357-D1 N
ENSBTAP00000052990-D1 Bos grunniens ENSBTAP00000052990-D1 N
ENSBTAG00000005098 Bos taurus ENSBTAG00000005098 N
HMGB1 Bos taurus ENSBTAG00000014862 N
ENSBTAG00000015315 Bos taurus ENSBTAG00000015315 N
ENSBTAG00000020685 Bos taurus ENSBTAG00000020685 N
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N
ENSCJAG00000007095 Callithrix jacchus ENSCJAG00000007095 N
ENSCJAG00000007419 Callithrix jacchus ENSCJAG00000007419 N
ENSCJAG00000008378 Callithrix jacchus ENSCJAG00000008378 N
ENSCJAG00000008384 Callithrix jacchus ENSCJAG00000008384 N
ENSCJAG00000011146 Callithrix jacchus ENSCJAG00000011146 N
ENSCJAG00000014197 Callithrix jacchus ENSCJAG00000014197 N
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N
ENSCJAG00000014991 Callithrix jacchus ENSCJAG00000014991 N
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N
ENSCJAG00000033913 Callithrix jacchus ENSCJAG00000033913 N
ENSCAFG00000023930 Canis familiaris ENSCAFG00000023930 N
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N
ENSCSAG00000012719 Chlorocebus sabaeus ENSCSAG00000012719 N
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N
ENSCSAG00000015385 Chlorocebus sabaeus ENSCSAG00000015385 N
hmgb2a Danio rerio ENSDARG00000029722 N
hmgb1a Danio rerio ENSDARG00000099175 N
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N
ENSDNOG00000036626 Dasypus novemcinctus ENSDNOG00000036626 N
ENSDNOG00000041663 Dasypus novemcinctus ENSDNOG00000041663 N
ENSDNOG00000046844 Dasypus novemcinctus ENSDNOG00000046844 N
ENSDNOG00000047452 Dasypus novemcinctus ENSDNOG00000047452 N
ENSETEG00000009246 Echinops telfairi ENSETEG00000009246 N
ENSETEG00000013458 Echinops telfairi ENSETEG00000013458 N
ENSETEG00000016379 Echinops telfairi ENSETEG00000016379 N
ENSECAG00000003655 Equus caballus ENSECAG00000003655 N
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N
ENSFCAG00000028961 Felis catus ENSFCAG00000028961 N
ENSGMOG00000010657 Gadus morhua ENSGMOG00000010657 N
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N
Gfo_R010508 Geospiza fortis Gfo_R010508 N
ENSGGOG00000007804 Gorilla gorilla ENSGGOG00000007804 N
ENSGGOG00000025109 Gorilla gorilla ENSGGOG00000025109 N
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N
ENSSTOG00000007009 Ictidomys tridecemlineatus ENSSTOG00000007009 N
ENSSTOG00000012404 Ictidomys tridecemlineatus ENSSTOG00000012404 N
ENSLAFG00000030388 Loxodonta africana ENSLAFG00000030388 N
ENSMMUP00000017448 Macaca fascicularis ENSMMUP00000017448 N
ENSMMUP00000022848 Macaca fascicularis ENSMMUP00000022848 N
ENSMMUP00000039817 Macaca fascicularis ENSMMUP00000039817 N
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N
ENSMMUG00000002662 Macaca mulatta ENSMMUG00000002662 N
ENSMMUG00000013266 Macaca mulatta ENSMMUG00000013266 N
ENSMMUG00000017359 Macaca mulatta ENSMMUG00000017359 N
ENSMMUG00000018606 Macaca mulatta ENSMMUG00000018606 N
ENSMMUG00000019832 Macaca mulatta ENSMMUG00000019832 N
HMGB2 Macaca mulatta ENSMMUG00000020008 N
ENSMEUG00000009480 Macropus eugenii ENSMEUG00000009480 N
ENSMEUG00000011289 Macropus eugenii ENSMEUG00000011289 N
ENSMICG00000000573 Microcebus murinus ENSMICG00000000573 N
HMGB1 Microcebus murinus ENSMICG00000006213 N
ENSMICG00000016224 Microcebus murinus ENSMICG00000016224 N
HMGB1 Monodelphis domestica ENSMODG00000004443 N
ENSMODG00000004606 Monodelphis domestica ENSMODG00000004606 N
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N
ENSMPUG00000020113 Mustela putorius furo ENSMPUG00000020113 N
Myotis_brandtii_Hmgb1_10003213 Myotis brandtii Myotis_brandtii_Hmgb1_10003213 N
Myotis_brandtii_Hmgb1_10026956 Myotis brandtii Myotis_brandtii_Hmgb1_10026956 N
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N
Myotis_brandtii_HMGB3_10026974 Myotis brandtii Myotis_brandtii_HMGB3_10026974 N
ENSMLUG00000028530 Myotis lucifugus ENSMLUG00000028530 N
ENSONIG00000005505 Oreochromis niloticus ENSONIG00000005505 N
HMGB2 Ornithorhynchus anatinus ENSOANG00000029120 N
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N
ENSOCUG00000016030 Oryctolagus cuniculus ENSOCUG00000016030 N
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N
ENSOCUG00000023449 Oryctolagus cuniculus ENSOCUG00000023449 N
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N
ENSOCUG00000027747 Oryctolagus cuniculus ENSOCUG00000027747 N
hmgb1a Oryzias latipes ENSORLG00000003400 N
ENSOGAG00000010941 Otolemur garnettii ENSOGAG00000010941 N
ENSOGAG00000027410 Otolemur garnettii ENSOGAG00000027410 N
ENSOGAG00000028007 Otolemur garnettii ENSOGAG00000028007 N
ENSOGAG00000028411 Otolemur garnettii ENSOGAG00000028411 N
ENSOGAG00000029748 Otolemur garnettii ENSOGAG00000029748 N
ENSOGAG00000030052 Otolemur garnettii ENSOGAG00000030052 N
ENSOGAG00000030563 Otolemur garnettii ENSOGAG00000030563 N
ENSOGAG00000031959 Otolemur garnettii ENSOGAG00000031959 N
ENSOGAG00000032147 Otolemur garnettii ENSOGAG00000032147 N
ENSOGAG00000032152 Otolemur garnettii ENSOGAG00000032152 N
ENSOGAG00000032240 Otolemur garnettii ENSOGAG00000032240 N
ENSOGAG00000032325 Otolemur garnettii ENSOGAG00000032325 N
ENSOGAG00000033253 Otolemur garnettii ENSOGAG00000033253 N
ENSOGAG00000033437 Otolemur garnettii ENSOGAG00000033437 N
ENSOGAG00000034801 Otolemur garnettii ENSOGAG00000034801 N
ENSOARG00000005357 Ovis aries ENSOARG00000005357 N
ENSOARG00000005773 Ovis aries ENSOARG00000005773 N
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N
ENSPTRG00000013662 Pan troglodytes ENSPTRG00000013662 N
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N
ENSPANG00000010595 Papio anubis ENSPANG00000010595 N
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N
ENSPANG00000011772 Papio anubis ENSPANG00000011772 N
ENSPFOG00000004533 Poecilia formosa ENSPFOG00000004533 N
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N
ENSPPYG00000011668 Pongo abelii ENSPPYG00000011668 N
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N
Hmgb1-ps3 Rattus norvegicus ENSRNOG00000032420 N
AABR07025074.1 Rattus norvegicus ENSRNOG00000032550 N
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N
AABR07019870.1 Rattus norvegicus ENSRNOG00000038033 N
LOC108350839 Rattus norvegicus ENSRNOG00000038437 N
RGD1563668 Rattus norvegicus ENSRNOG00000038478 N
LOC100911637 Rattus norvegicus ENSRNOG00000048094 N
LOC100911637 Rattus norvegicus ENSRNOG00000048471 N
LOC688583 Rattus norvegicus ENSRNOG00000050910 N
Hmg1l1 Rattus norvegicus ENSRNOG00000051482 N
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N
HMGB2 Sus scrofa ENSSSCG00000009704 N
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N
ENSTGUG00000006267 Taeniopygia guttata ENSTGUG00000006267 N
hmgb1b Takifugu rubripes ENSTRUG00000004822 N
hmgb1a Takifugu rubripes ENSTRUG00000008452 N
ENSTSYG00000003868 Tarsius syrichta ENSTSYG00000003868 N
ENSTSYG00000012587 Tarsius syrichta ENSTSYG00000012587 N
hmgb1a Tetraodon nigroviridis ENSTNIG00000009909 N
ENSTBEG00000005874 Tupaia belangeri ENSTBEG00000005874 N
ENSTBEG00000009427 Tupaia belangeri ENSTBEG00000009427 N
ENSTBEG00000012989 Tupaia belangeri ENSTBEG00000012989 N
HMGB1 Tupaia belangeri ENSTBEG00000013046 N
ENSTBEG00000013995 Tupaia belangeri ENSTBEG00000013995 N
ENSTBEG00000014925 Tupaia belangeri ENSTBEG00000014925 N
ENSTBEG00000015340 Tupaia belangeri ENSTBEG00000015340 N
ENSTBEG00000015758 Tupaia belangeri ENSTBEG00000015758 N
ENSTBEG00000016187 Tupaia belangeri ENSTBEG00000016187 N
ENSTBEG00000017117 Tupaia belangeri ENSTBEG00000017117 N
AAC59859 Xenopus laevis AAC59859 N
AAH73449 Xenopus laevis AAH73449 N
BAA06440 Xenopus laevis BAA06440 N
hmgb2.S Xenopus laevis XB-GENE-1000251 N
ENSXMAG00000006844 Xiphophorus maculatus ENSXMAG00000006844 N