Pavir.J01332 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.J01332 T009542_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J01332.1.p AP2 103 154

Links

Other AP2 family TFs
Other Panicum virgatum TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_037_00132 Aquilegia coerulea Aquca_037_00132 I 0.677
fgenesh2_kg.2__42__AT1G64380.1 Arabidopsis lyrata fgenesh2_kg.2__42__AT1G64380.1 I 0.677
ERF061 Arabidopsis thaliana AT1G64380 I 0.677
Bostr.29223s0053 Boechera stricta Bostr.29223s0053 I 0.677
BRADI2G15847 Brachypodium distachyon BRADI2G15847 N 0.810
BRADI5G16450 Brachypodium distachyon BRADI5G16450 I 0.678
Cagra.0062s0002 Capsella grandiflora Cagra.0062s0002 I 0.677
Carubv10020622m.g Capsella rubella Carubv10020622m.g I 0.677
evm.TU.supercontig_79.43 Carica papaya evm.TU.supercontig_79.43 I 0.733
Cla011559 Citrullus lanatus Cla011559 I 0.704
Cla011093 Citrullus lanatus Cla011093 I 0.677
Ciclev10021265m.g Citrus clementina Ciclev10021265m.g I 0.688
orange1.1g045091m.g Citrus sinensis orange1.1g045091m.g I 0.688
Cucsa.303840 Cucumis sativus Cucsa.303840 I 0.704
Eucgr.D01731 Eucalyptus grandis Eucgr.D01731 I 0.701
Eucgr.E00857 Eucalyptus grandis Eucgr.E00857 I 0.677
Thhalv10023588m.g Eutrema salsugineum Thhalv10023588m.g I 0.677
gene32084-v1.0-hybrid Fragaria vesca gene32084-v1.0-hybrid I 0.677
GLYMA01G43450 Glycine max GLYMA01G43450 I 0.677
GLYMA11G02050 Glycine max GLYMA11G02050 I 0.677
Gorai.012G130600 Gossypium raimondii Gorai.012G130600 I 0.706
Gorai.008G253900 Gossypium raimondii Gorai.008G253900 I 0.785
Gorai.007G026200 Gossypium raimondii Gorai.007G026200 N 0.714
Gorai.006G207800 Gossypium raimondii Gorai.006G207800 I 0.799
MLOC_53577 Hordeum vulgare MLOC_53577 N 0.803
LPERR05G22130 Leersia perrieri LPERR05G22130 N 0.827
Lus10001898.g Linum usitatissimum Lus10001898.g I 0.677
Lus10003889.g Linum usitatissimum Lus10003889.g I 0.677
chr2.CM0060.390.nc Lotus japonicus chr2.CM0060.390.nc I 0.677
MDP0000292965 Malus domestica MDP0000292965 I 0.677
MDP0000861708 Malus domestica MDP0000861708 I 0.677
mgf016403m Mimulus guttatus mgf016403m I 0.737
mgf021167m Mimulus guttatus mgf021167m I 0.677
GSMUA_Achr1G27990_001 Musa acuminata GSMUA_Achr1G27990_001 N 0.718
GSMUA_Achr1G00070_001 Musa acuminata GSMUA_Achr1G00070_001 I 0.677
ORGLA05G0229700 Oryza glaberrima ORGLA05G0229700 N 0.827
ORGLA03G0412600 Oryza glaberrima ORGLA03G0412600 N 0.827
OGLUM05G28130 Oryza glumaepatula OGLUM05G28130 N 0.827
BGIOSGA017525 Oryza indica BGIOSGA017525 N 0.827
ONIVA05G28560 Oryza nivara ONIVA05G28560 N 0.827
OPUNC05G24070 Oryza punctata OPUNC05G24070 N 0.827
ORUFI05G28440 Oryza rufipogon ORUFI05G28440 N 0.827
OS05G0572000 Oryza sativa OS05G0572000 N 0.827
Pavir.J10163 Panicum virgatum Pavir.J10163 N 0.827
Pavir.Gb00710 Panicum virgatum Pavir.Gb00710 I 0.678
Pavir.Ga00913 Panicum virgatum Pavir.Ga00913 I 0.678
POPTR_0001s10540 Populus trichocarpa POPTR_0001s10540 I 0.677
Pm024053 Prunus mume Pm024053 I 0.677
PRUPE_ppa009005mg Prunus persica PRUPE_ppa009005mg I 0.677
30190.m010825 Ricinus communis 30190.m010825 I 0.677
SapurV1A.0035s0570 Salix purpurea SapurV1A.0035s0570 I 0.677
SapurV1A.0237s0310 Salix purpurea SapurV1A.0237s0310 I 0.677
Si012169m.g Setaria italica Si012169m.g I 0.678
Sb06g023313 Sorghum bicolor Sb06g023313 I 0.678
Sb09g029070 Sorghum bicolor Sb09g029070 N 0.810
VIT_19s0014g03180 Vitis vinifera VIT_19s0014g03180 I 0.700
GRMZM5G846057 Zea mays GRMZM5G846057 I 0.797
GRMZM2G100982 Zea mays GRMZM2G100982 I 0.797
GRMZM2G026926 Zea mays GRMZM2G026926 I 0.678