Aquca_077_00008 (Aquilegia coerulea)
AT hook

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02178 (AT_hook) IPR017956 Aquca_077_00008 T017985_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK26376.1
M01108_2.00 		Cannabis sativa
DDWWWAWW
WWTWWWHH		 PBM
Lambert et al.(2019)
pTH11261 		0.991 1.000
BRADI5G22430
M01674_2.00 		Brachypodium distachyon
VNRDDDHDD
HHDHHHYNB		 PBM
Weirauch et al.(2014)
pTH9242 		0.991 0.769
kmt2cb
M01679_2.00 		Danio rerio
WWAWAWAT
ATWTWTWW		 PBM
Weirauch et al.(2014)
pTH7876 		0.991 0.692
Ahctf1
M00750_2.00 		Mus musculus
AAAWAWAW
ATWTWTTT		 PBM
Weirauch et al.(2013)
pTH2361 		0.991 0.692
Xrp1
M01686_2.00 		Drosophila melanogaster
NNNNDWAWW
WWTWHNNNN		 PBM
Weirauch et al.(2014)
pTH9260 		0.991 0.692
Xrp1
M05900_2.00 		Drosophila melanogaster
RTKRYGYAAT
ATTRCRYMAY		 B1H
Zhu et al.(2011)
Xrp1_CG6272_SANGER_5_FBgn0261113 		0.991 0.692
ATEG_07399
M01676_2.00 		Aspergillus terreus
DHNNHNDWWW
WWWHNDNNDH		 PBM
Weirauch et al.(2014)
pTH9237 		0.991 0.615
phf21ab
M01680_2.00 		Gasterosteus aculeatus
AAAAWAAA
TTTWTTTT		 PBM
Weirauch et al.(2014)
pTH9180 		0.991 0.615
Setbp1
M01683_2.00 		Mus musculus
NDNNNNNNHN
NDNNNNNNHN		 PBM
Weirauch et al.(2014)
pTH1294 		0.991 0.615
MTR_4g101990
M01687_2.00 		Medicago truncatula
AAAWTAAT
ATTAWTTT		 PBM
Weirauch et al.(2014)
pTH9209 		0.991 0.615
PK00377.1
M01107_2.00 		Cannabis sativa
DAWWWAWW
WWTWWWTH		 PBM
Lambert et al.(2019)
pTH11338 		0.991 0.615
ENSACAG00000014978
M01677_2.00 		Anolis carolinensis
NNNNNDRH
DYHNNNNN		 PBM
Weirauch et al.(2014)
pTH9222 		0.991 0.538
phf21ab
M01678_2.00 		Danio rerio
NNNDNADW
WHTNHNNN		 PBM
Weirauch et al.(2014)
pTH9254 		0.991 0.538
PHF21A
M01681_2.00 		Meleagris gallopavo
HDNHNNDNHD
HDNHNNDNHD		 PBM
Weirauch et al.(2014)
pTH7875 		0.991 0.538
PHF21A
M01103_2.00 		Monodelphis domestica
NNNAWATWAATN
NATTWATWTNNN		 PBM
Lambert et al.(2019)
pTH9309 		0.991 0.538
PHF21A
M01682_2.00 		Monodelphis domestica
NNNNNHRH
DYDNNNNN		 PBM
Weirauch et al.(2014)
pTH9335 		0.991 0.538
Phf21a
M01684_2.00 		Mus musculus
NNNATATWAATN
NATTWATATNNN		 PBM
Weirauch et al.(2014)
pTH8550 		0.991 0.538
estExt_fgeneshNG_pg.C_820014
M01692_2.00 		Naegleria gruberi
NNNNNDRH
DYHNNNNN		 PBM
Weirauch et al.(2014)
pTH9380 		0.991 0.538
TVAG_474020
M01106_2.00 		Trichomonas vaginalis
DNWWWAWW
WWTWWWNH		 PBM
Lambert et al.(2019)
pTH11493 		0.991 0.346
SUM1
M00008_2.00 		Saccharomyces cerevisiae
NNDWWWH
DWWWHNN		 PBM
Badis et al.(2008)
SUM1_2124 		0.991 0.333
FGRRES_17512
M01105_2.00 		Fusarium graminearum
NNNDNWWWW
WWWWNHNNN		 PBM
Lambert et al.(2019)
pTH11412 		0.991 0.320
AHL13
M01672_2.00 		Arabidopsis thaliana
NAWWTAWWWN
NWWWTAWWTN		 PBM
Weirauch et al.(2014)
pTH8202 		0.991 0.308
BRADI3G55950
M01673_2.00 		Brachypodium distachyon
NNNNRHDDN
NHHDYNNNN		 PBM
Weirauch et al.(2014)
pTH9369 		0.991 0.308
OS02G0824300
M01688_2.00 		Oryza sativa
NNDWAWWN
NWWTWHNN		 PBM
Weirauch et al.(2014)
pTH8406 		0.991 0.308
SUM1
M07439_2.00 		Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0398.1 		0.991 0.308
SUM1
M08478_2.00 		Saccharomyces cerevisiae
RYGWCASWAAW
WTTWSTGWCRY		 Misc
DeBoer et al.(2011)
YDR310C_383 		0.991 0.308
SUM1
M08479_2.00 		Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH		 Misc
DeBoer et al.(2011)
YDR310C_478 		0.991 0.308
VIT_08s0007g04020
M01689_2.00 		Vitis vinifera
DBNDDDDDDN
NHHHHHHNVH		 PBM
Weirauch et al.(2014)
pTH9295 		0.991 0.280
Q7DLU9_PEA
M09772_2.00 		Pisum sativum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HMGIY_01 		0.991 0.231
HMGA2
M09771_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGA2_01 		0.991 0.231
ANIA_01690
M01675_2.00 		Aspergillus nidulans
NNNNRHDDN
NHHDYNNNN		 PBM
Weirauch et al.(2014)
pTH8216 		0.991 0.216
ENSPPYG00000004736
M01685_2.00 		Pongo abelii
NNNNDWWW
WWWHNNNN		 PBM
Weirauch et al.(2014)
pTH9279 		0.991 0.211
Hmga2
M00751_2.00 		Mus musculus
NNNNRHWWNN
NNWWDYNNNN		 PBM
Weirauch et al.(2013)
pTH3046 		0.991 0.205
HMGA1
M09769_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGIY_01 		0.991 0.205
HMGA1
M09770_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGIY_Q4 		0.991 0.205
NCU05635
M01694_2.00 		Neurospora crassa
NNNWWWWNNN
NNNWWWWNNN		 PBM
Weirauch et al.(2014)
pTH8863 		0.991 0.184
FGRRES_05233
M01104_2.00 		Fusarium graminearum
NNNDWWAWWH
DWWTWWHNNN		 PBM
Lambert et al.(2019)
pTH11377 		0.991 0.179
athp-3
M01691_2.00 		Caenorhabditis elegans
NNDDWDH
DHWHHNN		 PBM
Weirauch et al.(2014)
pTH9097 		0.991 0.145
NCU01145
M01693_2.00 		Neurospora crassa
RWATAWWTNN
NNAWWTATWY		 PBM
Weirauch et al.(2014)
pTH8916 		0.991 0.145
HMGA
M01671_2.00 		Arabidopsis thaliana
NNNNDWAWH
DWTWHNNNN		 PBM
Weirauch et al.(2014)
pTH7395 		0.991 0.135
HMG-I Y
M02652_2.00 		Pisum sativum
NDWVAAANRVMRWMAY
RTKWYKBYNTTTBWHN		 SELEX
Mathelier et al.(2014)
MA0045.1 		0.991 0.135
hmg-12
M01690_2.00 		Caenorhabditis elegans
NNAWWTAWWTNN
NNAWWTAWWTNN		 PBM
Weirauch et al.(2014)
pTH8997 		0.991 0.086
SUM1
M01517_2.00 		Saccharomyces cerevisiae
NNNDWAWW
WWTWHNNN		 PBM
Zhu et al.(2009)
Sum1 		0.991 0.000
For this family, TFs with SR scores > 0.990 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_077_00008.1 AT hook 19 31

Links

Other AT hook family TFs
Other Aquilegia coerulea TFs

1072 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_26235 Aegilops tauschii F775_26235 I
AMTR_s00064p00125250 Amborella trichopoda AMTR_s00064p00125250 I
Aquca_037_00296 Aquilegia coerulea Aquca_037_00296 I
TBP1 Arabidopsis lyrata fgenesh2_kg.3__1428__AT3G13445.1 I
TBP2 Arabidopsis lyrata fgenesh2_kg.1__4564__AT1G55520.2 I
TBP2 Arabidopsis thaliana AT1G55520 I
TBP1 Arabidopsis thaliana AT3G13445 I
Bostr.3640s0136 Boechera stricta Bostr.3640s0136 I
Bostr.6758s0027 Boechera stricta Bostr.6758s0027 I
BRADI1G13220 Brachypodium distachyon BRADI1G13220 I
Bo6g051360 Brassica oleracea Bo6g051360 I
Bo5g132530 Brassica oleracea Bo5g132530 I
Bo3g185290 Brassica oleracea Bo3g185290 I
Bra011920 Brassica rapa Bra011920 I
Bra027434 Brassica rapa Bra027434 I
Bra030855 Brassica rapa Bra030855 I
PK25605.1 Cannabis sativa PK25605.1 I
PK11932.1 Cannabis sativa PK11932.1 I
Cagra.0001s0028 Capsella grandiflora Cagra.0001s0028 I
Cagra.0690s0017 Capsella grandiflora Cagra.0690s0017 I
Carubv10010337m.g Capsella rubella Carubv10010337m.g I
Carubv10014676m.g Capsella rubella Carubv10014676m.g I
Ciclev10022324m.g Citrus clementina Ciclev10022324m.g I
Cucsa.142180 Cucumis sativus Cucsa.142180 I
Eucgr.K01483 Eucalyptus grandis Eucgr.K01483 I
Eucgr.J01752 Eucalyptus grandis Eucgr.J01752 I
Thhalv10011790m.g Eutrema salsugineum Thhalv10011790m.g I
Thhalv10021552m.g Eutrema salsugineum Thhalv10021552m.g I
gene04980-v1.0-hybrid Fragaria vesca gene04980-v1.0-hybrid N
gene04978-v1.0-hybrid Fragaria vesca gene04978-v1.0-hybrid N
gene04975-v1.0-hybrid Fragaria vesca gene04975-v1.0-hybrid N
gene01591-v1.0-hybrid Fragaria vesca gene01591-v1.0-hybrid I
GLYMA03G04500 Glycine max GLYMA03G04500 I
GLYMA19G28780 Glycine max GLYMA19G28780 I
GLYMA16G25450 Glycine max GLYMA16G25450 I
GLYMA09G41330 Glycine max GLYMA09G41330 I
Gorai.004G244700 Gossypium raimondii Gorai.004G244700 I
Gorai.007G288000 Gossypium raimondii Gorai.007G288000 I
Gorai.013G202900 Gossypium raimondii Gorai.013G202900 I
MLOC_44969 Hordeum vulgare MLOC_44969 I
LPERR12G14180 Leersia perrieri LPERR12G14180 I
Lus10002634.g Linum usitatissimum Lus10002634.g I
Lus10020260.g Linum usitatissimum Lus10020260.g I
LjT45I18.100.nd Lotus japonicus LjT45I18.100.nd I
MDP0000289755 Malus domestica MDP0000289755 I
cassava35685.valid.m1 Manihot esculenta cassava35685.valid.m1 I
cassava35684.valid.m1 Manihot esculenta cassava35684.valid.m1 I
cassava22625.valid.m1 Manihot esculenta cassava22625.valid.m1 I
MTR_7g072580 Medicago truncatula MTR_7g072580 I
MTR_4g029010 Medicago truncatula MTR_4g029010 I
mgf009543m Mimulus guttatus mgf009543m I
GSMUA_Achr6G23210_001 Musa acuminata GSMUA_Achr6G23210_001 I
GSMUA_Achr1G26830_001 Musa acuminata GSMUA_Achr1G26830_001 I
GSMUA_Achr5G08990_001 Musa acuminata GSMUA_Achr5G08990_001 I
Tbp Mus musculus ENSMUSG00000014767 D
OBART12G16890 Oryza barthii OBART12G16890 I
OBART03G28150 Oryza barthii OBART03G28150 I
OB03G33300 Oryza brachyantha OB03G33300 I
ORGLA03G0260300 Oryza glaberrima ORGLA03G0260300 I
ORGLA12G0202200 Oryza glaberrima ORGLA12G0202200 I
OGLUM12G18540 Oryza glumaepatula OGLUM12G18540 I
OGLUM03G28780 Oryza glumaepatula OGLUM03G28780 I
BGIOSGA037671 Oryza indica BGIOSGA037671 I
OMERI11G15350 Oryza meridionalis OMERI11G15350 I
OMERI03G24790 Oryza meridionalis OMERI03G24790 I
ONIVA03G29180 Oryza nivara ONIVA03G29180 I
OPUNC12G15370 Oryza punctata OPUNC12G15370 I
OPUNC03G25660 Oryza punctata OPUNC03G25660 I
OS12G0580300 Oryza sativa OS12G0580300 I
TBP2 Oryza sativa OS03G0657000 I
Pavir.Ib04166 Panicum virgatum Pavir.Ib04166 I
PDK_20s1715251g002 Phoenix dactylifera PDK_20s1715251g002 I
estExt_Genewise1.C_2460019 Physcomitrella patens estExt_Genewise1.C_2460019 I
POPTR_0013s05580 Populus trichocarpa POPTR_0013s05580 I
PRUPE_ppa011675mg Prunus persica PRUPE_ppa011675mg I
PRUPE_ppa011711mg Prunus persica PRUPE_ppa011711mg I
29950.m001154 Ricinus communis 29950.m001154 I
SapurV1A.0680s0010 Salix purpurea SapurV1A.0680s0010 I
SapurV1A.0308s0180 Salix purpurea SapurV1A.0308s0180 I
SELMODRAFT_163230 Selaginella moellendorffii SELMODRAFT_163230 I
SELMODRAFT_270329 Selaginella moellendorffii SELMODRAFT_270329 I
Si023295m.g Setaria italica Si023295m.g I
Si038805m.g Setaria italica Si038805m.g I
Solyc01g028930.2 Solanum lycopersicum Solyc01g028930.2 I
Sb08g022273 Sorghum bicolor Sb08g022273 I
Sb01g012880 Sorghum bicolor Sb01g012880 I
Traes_4BS_4F52653D8 Triticum aestivum Traes_4BS_4F52653D8 I
Traes_4DS_700213C0B Triticum aestivum Traes_4DS_700213C0B I
TRIUR3_13880 Triticum urartu TRIUR3_13880 I
GRMZM2G161418 Zea mays GRMZM2G161418 I
GRMZM2G149238 Zea mays GRMZM2G149238 I