gene04978-v1.0-hybrid (Fragaria vesca)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00352 (TBP) IPR000814 gene04978-v1.0-hybrid T343163_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna04978.1-v1.0-hybrid TBP 1 43
mrna04978.1-v1.0-hybrid TBP 51 118

Links

Other TBP family TFs
Other Fragaria vesca TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene22998-v1.0-hybrid Fragaria vesca gene22998-v1.0-hybrid N 0.928
gene04975-v1.0-hybrid Fragaria vesca gene04975-v1.0-hybrid N 0.910
gene04980-v1.0-hybrid Fragaria vesca gene04980-v1.0-hybrid N 0.865
Solyc01g028930.2 Solanum lycopersicum Solyc01g028930.2 I 0.721
estExt_Genewise1.C_2460019 Physcomitrella patens estExt_Genewise1.C_2460019 I 0.712
e_gw1.13.259.1 Physcomitrella patens e_gw1.13.259.1 I 0.712
cassava35685.valid.m1 Manihot esculenta cassava35685.valid.m1 I 0.712
cassava35684.valid.m1 Manihot esculenta cassava35684.valid.m1 I 0.712
PRUPE_ppa011675mg Prunus persica PRUPE_ppa011675mg I 0.712
SELMODRAFT_163230 Selaginella moellendorffii SELMODRAFT_163230 I 0.712
29950.m001154 Ricinus communis 29950.m001154 I 0.712
cassava22625.valid.m1 Manihot esculenta cassava22625.valid.m1 I 0.712
mgf009543m Mimulus guttatus mgf009543m I 0.712
Eucgr.K01483 Eucalyptus grandis Eucgr.K01483 I 0.712
SapurV1A.0308s0180 Salix purpurea SapurV1A.0308s0180 I 0.712
SapurV1A.0680s0010 Salix purpurea SapurV1A.0680s0010 I 0.712
PDK_20s1715251g002 Phoenix dactylifera PDK_20s1715251g002 I 0.712
orange1.1g029591m.g Citrus sinensis orange1.1g029591m.g I 0.712
Gorai.013G202900 Gossypium raimondii Gorai.013G202900 I 0.712
POPTR_0013s05580 Populus trichocarpa POPTR_0013s05580 I 0.712
Gorai.004G244700 Gossypium raimondii Gorai.004G244700 I 0.712
Gorai.007G288000 Gossypium raimondii Gorai.007G288000 I 0.712
Ciclev10022324m.g Citrus clementina Ciclev10022324m.g I 0.712
SELMODRAFT_270329 Selaginella moellendorffii SELMODRAFT_270329 I 0.712
GSMUA_Achr6G23210_001 Musa acuminata GSMUA_Achr6G23210_001 I 0.712
GSMUA_Achr5G08990_001 Musa acuminata GSMUA_Achr5G08990_001 I 0.712
BGIOSGA037671 Oryza indica BGIOSGA037671 I 0.712
MTR_7g072580 Medicago truncatula MTR_7g072580 I 0.712
GSMUA_Achr1G26830_001 Musa acuminata GSMUA_Achr1G26830_001 I 0.712
mgf012506m Mimulus guttatus mgf012506m I 0.703
Aquca_037_00296 Aquilegia coerulea Aquca_037_00296 I 0.703
Eucgr.J01752 Eucalyptus grandis Eucgr.J01752 I 0.703
mgf012063m Mimulus guttatus mgf012063m I 0.703
LPERR12G14180 Leersia perrieri LPERR12G14180 I 0.703
MLOC_50796 Hordeum vulgare MLOC_50796 I 0.703
MTR_4g029010 Medicago truncatula MTR_4g029010 I 0.703
MLOC_44969 Hordeum vulgare MLOC_44969 I 0.703
Cucsa.142180 Cucumis sativus Cucsa.142180 I 0.703
gene01591-v1.0-hybrid Fragaria vesca gene01591-v1.0-hybrid I 0.703
MLOC_37365 Hordeum vulgare MLOC_37365 I 0.703
GSMUA_Achr7G01480_001 Musa acuminata GSMUA_Achr7G01480_001 I 0.703
GRMZM2G161418 Zea mays GRMZM2G161418 I 0.703
Pavir.J18057 Panicum virgatum Pavir.J18057 I 0.703
Pavir.Ib04166 Panicum virgatum Pavir.Ib04166 I 0.703
BRADI1G13220 Brachypodium distachyon BRADI1G13220 I 0.703
PK11932.1 Cannabis sativa PK11932.1 I 0.703
BGIOSGA013244 Oryza indica BGIOSGA013244 I 0.703
LjT45I18.100.nd Lotus japonicus LjT45I18.100.nd I 0.703
BRADI3G27190 Brachypodium distachyon BRADI3G27190 I 0.703
Lus10020260.g Linum usitatissimum Lus10020260.g I 0.703
GLYMA19G28780 Glycine max GLYMA19G28780 I 0.703
GRMZM2G149238 Zea mays GRMZM2G149238 I 0.703
GLYMA09G41330 Glycine max GLYMA09G41330 I 0.703
F775_26897 Aegilops tauschii F775_26897 I 0.703
Lus10002634.g Linum usitatissimum Lus10002634.g I 0.703
TRIUR3_32346 Triticum urartu TRIUR3_32346 I 0.703
TRIUR3_20012 Triticum urartu TRIUR3_20012 I 0.703
TBP2 Oryza sativa OS03G0657000 I 0.703
ORUFI12G18750 Oryza rufipogon ORUFI12G18750 I 0.703
ORUFI03G29280 Oryza rufipogon ORUFI03G29280 I 0.703
OS12G0580300 Oryza sativa OS12G0580300 I 0.703
OGLUM03G28780 Oryza glumaepatula OGLUM03G28780 I 0.703
OBART12G16890 Oryza barthii OBART12G16890 I 0.703
POPTR_0019s04890 Populus trichocarpa POPTR_0019s04890 I 0.703
ORGLA12G0202200 Oryza glaberrima ORGLA12G0202200 I 0.703
ORGLA03G0260300 Oryza glaberrima ORGLA03G0260300 I 0.703
OMERI11G15350 Oryza meridionalis OMERI11G15350 I 0.703
OMERI03G24790 Oryza meridionalis OMERI03G24790 I 0.703
ONIVA03G29180 Oryza nivara ONIVA03G29180 I 0.703
ONIVA12G15220 Oryza nivara ONIVA12G15220 I 0.703
OPUNC12G15370 Oryza punctata OPUNC12G15370 I 0.703
OPUNC03G25660 Oryza punctata OPUNC03G25660 I 0.703
PRUPE_ppa011711mg Prunus persica PRUPE_ppa011711mg I 0.703
Sb01g012880 Sorghum bicolor Sb01g012880 I 0.703
Traes_4AL_D48452758 Triticum aestivum Traes_4AL_D48452758 I 0.703
Traes_1BS_2CB2C53C1 Triticum aestivum Traes_1BS_2CB2C53C1 I 0.703
Traes_4BS_4F52653D8 Triticum aestivum Traes_4BS_4F52653D8 I 0.703
Traes_4DS_700213C0B Triticum aestivum Traes_4DS_700213C0B I 0.703
Traes_5BS_AD70A5AF7 Triticum aestivum Traes_5BS_AD70A5AF7 I 0.703
Traes_5AS_03EE89960 Triticum aestivum Traes_5AS_03EE89960 I 0.703
Traes_1BL_2CB2C53C1 Triticum aestivum Traes_1BL_2CB2C53C1 I 0.703
Traes_1AL_60B57FD46 Triticum aestivum Traes_1AL_60B57FD46 I 0.703
OBART03G28150 Oryza barthii OBART03G28150 I 0.703
Sb08g022273 Sorghum bicolor Sb08g022273 I 0.703
TBP2 Arabidopsis thaliana AT1G55520 I 0.703
Si023295m.g Setaria italica Si023295m.g I 0.703
OB03G33300 Oryza brachyantha OB03G33300 I 0.703
Si038805m.g Setaria italica Si038805m.g I 0.703
OGLUM12G18540 Oryza glumaepatula OGLUM12G18540 I 0.703