L892_g25757 (Steinernema scapterisci)
AT hook

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02178 (AT_hook) IPR017956 L892_g25757 T018197_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK00377.1
M01107_2.00 		Cannabis sativa
DAWWWAWW
WWTWWWTH		 PBM
Lambert et al.(2019)
pTH11338 		0.991 0.769
MTR_4g101990
M01687_2.00 		Medicago truncatula
AAAWTAAT
ATTAWTTT		 PBM
Weirauch et al.(2014)
pTH9209 		0.991 0.692
BRADI5G22430
M01674_2.00 		Brachypodium distachyon
VNRDDDHDD
HHDHHHYNB		 PBM
Weirauch et al.(2014)
pTH9242 		0.991 0.538
Setbp1
M01683_2.00 		Mus musculus
NDNNNNNNHN
NDNNNNNNHN		 PBM
Weirauch et al.(2014)
pTH1294 		0.991 0.538
Ahctf1
M00750_2.00 		Mus musculus
AAAWAWAW
ATWTWTTT		 PBM
Weirauch et al.(2013)
pTH2361 		0.991 0.538
Xrp1
M01686_2.00 		Drosophila melanogaster
NNNNDWAWW
WWTWHNNNN		 PBM
Weirauch et al.(2014)
pTH9260 		0.991 0.538
PK26376.1
M01108_2.00 		Cannabis sativa
DDWWWAWW
WWTWWWHH		 PBM
Lambert et al.(2019)
pTH11261 		0.991 0.538
Xrp1
M05900_2.00 		Drosophila melanogaster
RTKRYGYAAT
ATTRCRYMAY		 B1H
Zhu et al.(2011)
Xrp1_CG6272_SANGER_5_FBgn0261113 		0.991 0.538
ATEG_07399
M01676_2.00 		Aspergillus terreus
DHNNHNDWWW
WWWHNDNNDH		 PBM
Weirauch et al.(2014)
pTH9237 		0.991 0.462
ENSACAG00000014978
M01677_2.00 		Anolis carolinensis
NNNNNDRH
DYHNNNNN		 PBM
Weirauch et al.(2014)
pTH9222 		0.991 0.462
phf21ab
M01678_2.00 		Danio rerio
NNNDNADW
WHTNHNNN		 PBM
Weirauch et al.(2014)
pTH9254 		0.991 0.462
kmt2cb
M01679_2.00 		Danio rerio
WWAWAWAT
ATWTWTWW		 PBM
Weirauch et al.(2014)
pTH7876 		0.991 0.462
phf21ab
M01680_2.00 		Gasterosteus aculeatus
AAAAWAAA
TTTWTTTT		 PBM
Weirauch et al.(2014)
pTH9180 		0.991 0.462
PHF21A
M01681_2.00 		Meleagris gallopavo
HDNHNNDNHD
HDNHNNDNHD		 PBM
Weirauch et al.(2014)
pTH7875 		0.991 0.462
PHF21A
M01103_2.00 		Monodelphis domestica
NNNAWATWAATN
NATTWATWTNNN		 PBM
Lambert et al.(2019)
pTH9309 		0.991 0.462
PHF21A
M01682_2.00 		Monodelphis domestica
NNNNNHRH
DYDNNNNN		 PBM
Weirauch et al.(2014)
pTH9335 		0.991 0.462
Phf21a
M01684_2.00 		Mus musculus
NNNATATWAATN
NATTWATATNNN		 PBM
Weirauch et al.(2014)
pTH8550 		0.991 0.462
estExt_fgeneshNG_pg.C_820014
M01692_2.00 		Naegleria gruberi
NNNNNDRH
DYHNNNNN		 PBM
Weirauch et al.(2014)
pTH9380 		0.991 0.462
VIT_08s0007g04020
M01689_2.00 		Vitis vinifera
DBNDDDDDDN
NHHHHHHNVH		 PBM
Weirauch et al.(2014)
pTH9295 		0.991 0.400
FGRRES_17512
M01105_2.00 		Fusarium graminearum
NNNDNWWWW
WWWWNHNNN		 PBM
Lambert et al.(2019)
pTH11412 		0.991 0.360
AHL13
M01672_2.00 		Arabidopsis thaliana
NAWWTAWWWN
NWWWTAWWTN		 PBM
Weirauch et al.(2014)
pTH8202 		0.991 0.346
BRADI3G55950
M01673_2.00 		Brachypodium distachyon
NNNNRHDDN
NHHDYNNNN		 PBM
Weirauch et al.(2014)
pTH9369 		0.991 0.346
OS02G0824300
M01688_2.00 		Oryza sativa
NNDWAWWN
NWWTWHNN		 PBM
Weirauch et al.(2014)
pTH8406 		0.991 0.346
TVAG_474020
M01106_2.00 		Trichomonas vaginalis
DNWWWAWW
WWTWWWNH		 PBM
Lambert et al.(2019)
pTH11493 		0.991 0.308
SUM1
M00008_2.00 		Saccharomyces cerevisiae
NNDWWWH
DWWWHNN		 PBM
Badis et al.(2008)
SUM1_2124 		0.991 0.250
SUM1
M07439_2.00 		Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0398.1 		0.991 0.231
SUM1
M08478_2.00 		Saccharomyces cerevisiae
RYGWCASWAAW
WTTWSTGWCRY		 Misc
DeBoer et al.(2011)
YDR310C_383 		0.991 0.231
SUM1
M08479_2.00 		Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH		 Misc
DeBoer et al.(2011)
YDR310C_478 		0.991 0.231
Q7DLU9_PEA
M09772_2.00 		Pisum sativum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HMGIY_01 		0.991 0.231
NCU05635
M01694_2.00 		Neurospora crassa
NNNWWWWNNN
NNNWWWWNNN		 PBM
Weirauch et al.(2014)
pTH8863 		0.991 0.211
ANIA_01690
M01675_2.00 		Aspergillus nidulans
NNNNRHDDN
NHHDYNNNN		 PBM
Weirauch et al.(2014)
pTH8216 		0.991 0.189
HMGA2
M09771_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGA2_01 		0.991 0.179
ENSPPYG00000004736
M01685_2.00 		Pongo abelii
NNNNDWWW
WWWHNNNN		 PBM
Weirauch et al.(2014)
pTH9279 		0.991 0.158
Hmga2
M00751_2.00 		Mus musculus
NNNNRHWWNN
NNWWDYNNNN		 PBM
Weirauch et al.(2013)
pTH3046 		0.991 0.154
HMGA1
M09769_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGIY_01 		0.991 0.154
HMGA1
M09770_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGIY_Q4 		0.991 0.154
NCU01145
M01693_2.00 		Neurospora crassa
RWATAWWTNN
NNAWWTATWY		 PBM
Weirauch et al.(2014)
pTH8916 		0.991 0.145
FGRRES_05233
M01104_2.00 		Fusarium graminearum
NNNDWWAWWH
DWWTWWHNNN		 PBM
Lambert et al.(2019)
pTH11377 		0.991 0.128
HMGA
M01671_2.00 		Arabidopsis thaliana
NNNNDWAWH
DWTWHNNNN		 PBM
Weirauch et al.(2014)
pTH7395 		0.991 0.115
HMG-I Y
M02652_2.00 		Pisum sativum
NDWVAAANRVMRWMAY
RTKWYKBYNTTTBWHN		 SELEX
Mathelier et al.(2014)
MA0045.1 		0.991 0.115
athp-3
M01691_2.00 		Caenorhabditis elegans
NNDDWDH
DHWHHNN		 PBM
Weirauch et al.(2014)
pTH9097 		0.991 0.097
hmg-12
M01690_2.00 		Caenorhabditis elegans
NNAWWTAWWTNN
NNAWWTAWWTNN		 PBM
Weirauch et al.(2014)
pTH8997 		0.991 0.086
SUM1
M01517_2.00 		Saccharomyces cerevisiae
NNNDWAWW
WWTWHNNN		 PBM
Zhu et al.(2009)
Sum1 		0.991 0.000
For this family, TFs with SR scores > 0.990 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L892_g25757.t1 AT hook 184 196

Links

Other AT hook family TFs
Other Steinernema scapterisci TFs

1072 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000013492 Ailuropoda melanoleuca ENSAMEG00000013492 I
Alligator_sinensis_CCG000124.1 Alligator sinensis Alligator_sinensis_CCG000124.1 I
ENSAPLG00000007110 Anas platyrhynchos ENSAPLG00000007110 I
HBP1 Anolis carolinensis ENSACAG00000015023 I
GB51010 Apis mellifera GB51010 I
Afo_R001715 Aptenodytes forsteri Afo_R001715 I
AGOS_AAR026W Ashbya gossypii AGOS_AAR026W I
ENSAMXG00000017678 Astyanax mexicanus ENSAMXG00000017678 I
ENSBTAP00000044156-D1 Bos grunniens ENSBTAP00000044156-D1 I
HBP1 Bos taurus ENSBTAG00000005524 I
e_gw.61.169.1 Branchiostoma floridae e_gw.61.169.1 I
e_gw.633.29.1 Branchiostoma floridae e_gw.633.29.1 I
Brh_R002687 Buceros rhinoceros Brh_R002687 I
HBP1 Callithrix jacchus ENSCJAG00000016260 I
Aan_R000440 Calypte anna Aan_R000440 I
CANTEDRAFT_136140 Candida tenuis CANTEDRAFT_136140 I
HBP1 Canis familiaris ENSCAFG00000003939 I
HBP1 Cavia porcellus ENSCPOG00000002375 I
Cmyd_10005373 Chelonia mydas Cmyd_10005373 I
ENSCSAG00000011395 Chlorocebus sabaeus ENSCSAG00000011395 I
csin104163 Clonorchis sinensis csin104163 I
CGI_10003963 Crassostrea gigas CGI_10003963 I
hbp1 Danio rerio ENSDARG00000028517 I
DAPPUDRAFT_313324 Daphnia pulex DAPPUDRAFT_313324 I
HBP1 Dasypus novemcinctus ENSDNOG00000004405 I
DICSQDRAFT_40774 Dichomitus squalens DICSQDRAFT_40774 I
Hbp1 Dipodomys ordii ENSDORG00000010576 I
GI22721 Drosophila mojavensis FBgn0145448 I
GL12097 Drosophila persimilis FBgn0149705 I
GA30228 Drosophila pseudoobscura FBgn0263363 I
HBP1 Echinops telfairi ENSETEG00000018542 I
ECPE_0001539401 Echinostoma caproni ECPE_0001539401 I
HBP1 Equus caballus ENSECAG00000020969 I
Ecym_1257 Eremothecium cymbalariae Ecym_1257 I
D915_09544 Fasciola hepatica D915_09544 I
ENSFALG00000010259 Ficedula albicollis ENSFALG00000010259 I
ENSGMOG00000013782 Gadus morhua ENSGMOG00000013782 I
HBP1 Gallus gallus ENSGALG00000008050 I
hbp1 Gasterosteus aculeatus ENSGACG00000010054 I
ENSGACG00000019192 Gasterosteus aculeatus ENSGACG00000019192 I
Gfo_R011321 Geospiza fortis Gfo_R011321 I
HBP1 Gorilla gorilla ENSGGOG00000007788 I
HelroG148167 Helobdella robusta HelroG148167 I
HBP1 Homo sapiens ENSG00000105856 D
XP_002155149.1 Hydra magnipapillata XP_002155149.1 I
ENSSTOG00000013846 Ictidomys tridecemlineatus ENSSTOG00000013846 I
ISCW021979 Ixodes scapularis ISCW021979 I
ENSLACG00000009119 Latimeria chalumnae ENSLACG00000009119 I
ENSLOCG00000015822 Lepisosteus oculatus ENSLOCG00000015822 I
HBP1 Loxodonta africana ENSLAFG00000005317 I
ENSP00000420500 Macaca fascicularis ENSP00000420500 I
HBP1 Macaca mulatta ENSMMUG00000015409 I
ENSMEUG00000011116 Macropus eugenii ENSMEUG00000011116 I
HBP1 Meleagris gallopavo ENSMGAG00000006880 I
HBP1 Microcebus murinus ENSMICG00000012858 I
ML040423a Mnemiopsis leidyi ML040423a I
HBP1 Monodelphis domestica ENSMODG00000016376 I
ENSMPUG00000018249 Mustela putorius furo ENSMPUG00000018249 I
Hbp1 Mus musculus ENSMUSG00000002996 D
Myotis_brandtii_HBP1_10033916 Myotis brandtii Myotis_brandtii_HBP1_10033916 I
HBP1 Myotis lucifugus ENSMLUG00000012425 I
NEMVEDRAFT_v1g120503 Nematostella vectensis NEMVEDRAFT_v1g120503 I
ENSNLEG00000008761 Nomascus leucogenys ENSNLEG00000008761 I
SNAPOd2T00000335001 Oikopleura dioica SNAPOd2T00000335001 I
T265_01499 Opisthorchis viverrini T265_01499 I
ENSONIG00000008523 Oreochromis niloticus ENSONIG00000008523 I
ENSONIG00000011868 Oreochromis niloticus ENSONIG00000011868 I
HBP1 Ornithorhynchus anatinus ENSOANG00000003174 I
HBP1 Oryctolagus cuniculus ENSOCUG00000012758 I
hbp1 Oryzias latipes ENSORLG00000004396 I
ENSORLG00000009474 Oryzias latipes ENSORLG00000009474 I
HBP1 Otolemur garnettii ENSOGAG00000013102 I
ENSOARG00000005055 Ovis aries ENSOARG00000005055 I
HBP1 Pan troglodytes ENSPTRG00000019575 I
ENSPANG00000024385 Papio anubis ENSPANG00000024385 I
PHUM534240 Pediculus humanus PHUM534240 I
ENSPSIG00000012478 Pelodiscus sinensis ENSPSIG00000012478 I
ENSPMAG00000002631 Petromyzon marinus ENSPMAG00000002631 I
ENSPFOG00000003951 Poecilia formosa ENSPFOG00000003951 I
ENSPFOG00000012271 Poecilia formosa ENSPFOG00000012271 I
Pvit_03004 Pogona vitticeps Pvit_03004 I
ENSPPYG00000017898 Pongo abelii ENSPPYG00000017898 I
HBP1 Procavia capensis ENSPCAG00000014060 I
HBP1 Pteropus vampyrus ENSPVAG00000014543 I
Hbp1 Rattus norvegicus ENSRNOG00000008927 I
AACERI_AaceriAAR026W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAR026W I
ENSSHAG00000010948 Sarcophilus harrisii ENSSHAG00000010948 I
Smp_148110 Schistosoma mansoni Smp_148110 I
HBP1 Sorex araneus ENSSARG00000007731 I
SMAR013235 Strigamia maritima SMAR013235 I
HBP1 Taeniopygia guttata ENSTGUG00000003100 I
ENSTRUG00000011881 Takifugu rubripes ENSTRUG00000011881 I
hbp1 Takifugu rubripes ENSTRUG00000016990 I
ENSTSYG00000010057 Tarsius syrichta ENSTSYG00000010057 I
tetur23g00840 Tetranychus urticae tetur23g00840 I
ENSTNIG00000002023 Tetraodon nigroviridis ENSTNIG00000002023 I
hbp1 Tetraodon nigroviridis ENSTNIG00000016027 I
TriadG55419 Trichoplax adhaerens TriadG55419 I
HBP1 Tupaia belangeri ENSTBEG00000007793 I
HBP1 Tursiops truncatus ENSTTRG00000006826 I
Tal_R010197 Tyto alba Tal_R010197 I
HBP1 Vicugna pacos ENSVPAG00000008629 I
hbp1.S Xenopus laevis XB-GENE-17342930 I
hbp1.L Xenopus laevis XB-GENE-950348 I
hbp1 Xenopus tropicalis XB-GENE-950343 I
ENSXMAG00000007586 Xiphophorus maculatus ENSXMAG00000007586 I
ENSXMAG00000016455 Xiphophorus maculatus ENSXMAG00000016455 I
L798_09303 Zootermopsis nevadensis L798_09303 I
ZBAI_00389 Zygosaccharomyces bailii ZBAI_00389 I
ZBAI_05541 Zygosaccharomyces bailii ZBAI_05541 I
ZYRO0C16214g Zygosaccharomyces rouxii ZYRO0C16214g I