CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AT5G06250
(
Arabidopsis thaliana
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
AT5G06250
T018467_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G06250.1
B3
46
159
FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRRRG
AT5G06250.2
B3
46
159
FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRRRG
AT5G06250.3
B3
46
159
FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRRRG
AT5G06250.4
B3
46
159
FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRRRG
AT5G06250.5
B3
46
159
FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRRRG
Links
Other
B3
family TFs
Other
Arabidopsis thaliana
TFs
265 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000005976
Ailuropoda melanoleuca
ENSAMEG00000005976
I
0.000
ENSAMEG00000018268
Ailuropoda melanoleuca
ENSAMEG00000018268
I
0.000
Alligator_sinensis_CCG008430.1
Alligator sinensis
Alligator_sinensis_CCG008430.1
I
0.000
Alligator_sinensis_CCG015622.1
Alligator sinensis
Alligator_sinensis_CCG015622.1
I
0.000
ENSAPLG00000010348
Anas platyrhynchos
ENSAPLG00000010348
I
0.000
ENSAPLG00000014646
Anas platyrhynchos
ENSAPLG00000014646
I
0.000
IRF8
Anolis carolinensis
ENSACAG00000005409
I
0.000
IRF4
Anolis carolinensis
ENSACAG00000017711
I
0.000
Afo_R010468
Aptenodytes forsteri
Afo_R010468
I
0.000
Afo_R011419
Aptenodytes forsteri
Afo_R011419
I
0.000
Afo_R014746
Aptenodytes forsteri
Afo_R014746
I
0.000
ENSAMXG00000002697
Astyanax mexicanus
ENSAMXG00000002697
I
0.000
ENSAMXG00000003452
Astyanax mexicanus
ENSAMXG00000003452
I
0.000
ENSAMXG00000004911
Astyanax mexicanus
ENSAMXG00000004911
I
0.000
ENSAMXG00000006093
Astyanax mexicanus
ENSAMXG00000006093
I
0.000
ENSAMXG00000016370
Astyanax mexicanus
ENSAMXG00000016370
I
0.000
ENSP00000268638-D1
Bos grunniens
ENSP00000268638-D1
I
0.000
ENSP00000370343-D1
Bos grunniens
ENSP00000370343-D1
I
0.000
IRF4
Bos taurus
ENSBTAG00000002929
I
0.000
IRF8
Bos taurus
ENSBTAG00000017824
I
0.000
Brh_R000433
Buceros rhinoceros
Brh_R000433
I
0.000
Brh_R009589
Buceros rhinoceros
Brh_R009589
I
0.000
IRF8
Callithrix jacchus
ENSCJAG00000017331
I
0.000
IRF4
Callithrix jacchus
ENSCJAG00000019524
I
0.000
Aan_R009222
Calypte anna
Aan_R009222
I
0.000
Aan_R012662
Calypte anna
Aan_R012662
I
0.000
Aan_R015695
Calypte anna
Aan_R015695
I
0.000
IRF8
Canis familiaris
ENSCAFG00000019919
I
0.000
IRF4
Cavia porcellus
ENSCPOG00000003562
I
0.000
ENSCPOG00000027266
Cavia porcellus
ENSCPOG00000027266
I
0.000
Cmyd_10009547
Chelonia mydas
Cmyd_10009547
I
0.000
Cmyd_10011521
Chelonia mydas
Cmyd_10011521
I
0.000
Cmyd_10021085
Chelonia mydas
Cmyd_10021085
I
0.000
ENSCSAG00000003142
Chlorocebus sabaeus
ENSCSAG00000003142
I
0.000
ENSCSAG00000007164
Chlorocebus sabaeus
ENSCSAG00000007164
I
0.000
IRF4
Choloepus hoffmanni
ENSCHOG00000012417
I
0.000
irf4a
Danio rerio
ENSDARG00000006560
I
0.000
irf9
Danio rerio
ENSDARG00000016457
I
0.000
irf10
Danio rerio
ENSDARG00000027658
I
0.000
irf4b
Danio rerio
ENSDARG00000055374
I
0.000
irf8
Danio rerio
ENSDARG00000056407
I
0.000
IRF8
Dasypus novemcinctus
ENSDNOG00000038898
I
0.000
Irf4
Dipodomys ordii
ENSDORG00000014895
I
0.000
IRF4
Echinops telfairi
ENSETEG00000018472
I
0.000
IRF8
Equus caballus
ENSECAG00000015449
I
0.000
IRF4
Equus caballus
ENSECAG00000016808
I
0.000
IRF8
Erinaceus europaeus
ENSEEUG00000002644
I
0.000
IRF4
Erinaceus europaeus
ENSEEUG00000007703
I
0.000
IRF8
Felis catus
ENSFCAG00000007615
I
0.000
IRF4
Felis catus
ENSFCAG00000022941
I
0.000
ENSFALG00000005506
Ficedula albicollis
ENSFALG00000005506
I
0.000
ENSFALG00000006647
Ficedula albicollis
ENSFALG00000006647
I
0.000
ENSFALG00000013071
Ficedula albicollis
ENSFALG00000013071
I
0.000
ENSGMOG00000003945
Gadus morhua
ENSGMOG00000003945
I
0.000
ENSGMOG00000005047
Gadus morhua
ENSGMOG00000005047
I
0.000
ENSGMOG00000016994
Gadus morhua
ENSGMOG00000016994
I
0.000
IRF8
Gallus gallus
ENSGALG00000005757
I
0.000
ENSGALG00000006448
Gallus gallus
ENSGALG00000006448
I
0.000
ENSGALG00000012830
Gallus gallus
ENSGALG00000012830
I
0.000
irf4b
Gasterosteus aculeatus
ENSGACG00000004966
I
0.000
irf8
Gasterosteus aculeatus
ENSGACG00000015958
I
0.000
irf4a
Gasterosteus aculeatus
ENSGACG00000016461
I
0.000
Gfo_R000501
Geospiza fortis
Gfo_R000501
I
0.000
Gfo_R003357
Geospiza fortis
Gfo_R003357
I
0.000
Gfo_R005312
Geospiza fortis
Gfo_R005312
I
0.000
IRF4
Gorilla gorilla
ENSGGOG00000012342
I
0.000
IRF8
Gorilla gorilla
ENSGGOG00000028251
I
0.000
IRF4
Homo sapiens
ENSG00000137265
D
0.000
IRF8
Homo sapiens
ENSG00000140968
D
0.000
ENSSTOG00000011470
Ictidomys tridecemlineatus
ENSSTOG00000011470
I
0.000
ENSSTOG00000028363
Ictidomys tridecemlineatus
ENSSTOG00000028363
I
0.000
ENSLACG00000004633
Latimeria chalumnae
ENSLACG00000004633
I
0.000
ENSLACG00000005859
Latimeria chalumnae
ENSLACG00000005859
I
0.000
ENSLACG00000007228
Latimeria chalumnae
ENSLACG00000007228
I
0.000
ENSLOCG00000001013
Lepisosteus oculatus
ENSLOCG00000001013
I
0.000
ENSLOCG00000001187
Lepisosteus oculatus
ENSLOCG00000001187
I
0.000
ENSLOCG00000003532
Lepisosteus oculatus
ENSLOCG00000003532
I
0.000
ENSLOCG00000013008
Lepisosteus oculatus
ENSLOCG00000013008
I
0.000
IRF8
Loxodonta africana
ENSLAFG00000010973
I
0.000
IRF4
Loxodonta africana
ENSLAFG00000017235
I
0.000
ENSP00000268638
Macaca fascicularis
ENSP00000268638
I
0.000
ENSP00000370343
Macaca fascicularis
ENSP00000370343
I
0.000
IRF4
Macaca mulatta
ENSMMUG00000018513
I
0.000
ENSMEUG00000002440
Macropus eugenii
ENSMEUG00000002440
I
0.000
ENSMICG00000011721
Microcebus murinus
ENSMICG00000011721
I
0.000
ENSMICG00000012090
Microcebus murinus
ENSMICG00000012090
I
0.000
IRF8
Monodelphis domestica
ENSMODG00000004572
I
0.000
IRF4
Monodelphis domestica
ENSMODG00000008383
I
0.000
ENSMODG00000019483
Monodelphis domestica
ENSMODG00000019483
I
0.000
ENSMPUG00000007848
Mustela putorius furo
ENSMPUG00000007848
I
0.000
ENSMPUG00000008641
Mustela putorius furo
ENSMPUG00000008641
I
0.000
Irf4
Mus musculus
ENSMUSG00000021356
D
0.000
Irf8
Mus musculus
ENSMUSG00000041515
D
0.000
Myotis_brandtii_Irf4_10020370
Myotis brandtii
Myotis_brandtii_Irf4_10020370
I
0.000
Myotis_brandtii_IRF8_10035313
Myotis brandtii
Myotis_brandtii_IRF8_10035313
I
0.000
IRF8
Myotis lucifugus
ENSMLUG00000005109
I
0.000
IRF4
Myotis lucifugus
ENSMLUG00000010058
I
0.000
ENSNLEG00000010631
Nomascus leucogenys
ENSNLEG00000010631
I
0.000
ENSNLEG00000011429
Nomascus leucogenys
ENSNLEG00000011429
I
0.000
IRF8
Ochotona princeps
ENSOPRG00000002139
I
0.000
IRF4
Ochotona princeps
ENSOPRG00000012683
I
0.000
Ogr05775
Ophisaurus gracilis
Ogr05775
I
0.000
Ogr08841
Ophisaurus gracilis
Ogr08841
I
0.000
ENSONIG00000005631
Oreochromis niloticus
ENSONIG00000005631
I
0.000
ENSONIG00000006398
Oreochromis niloticus
ENSONIG00000006398
I
0.000
ENSONIG00000009637
Oreochromis niloticus
ENSONIG00000009637
I
0.000
IRF8
Ornithorhynchus anatinus
ENSOANG00000003741
I
0.000
IRF4
Ornithorhynchus anatinus
ENSOANG00000006326
I
0.000
IRF8
Oryctolagus cuniculus
ENSOCUG00000000536
I
0.000
IRF4
Oryctolagus cuniculus
ENSOCUG00000009374
I
0.000
irf4b
Oryzias latipes
ENSORLG00000012712
I
0.000
irf4a
Oryzias latipes
ENSORLG00000017242
I
0.000
irf8
Oryzias latipes
ENSORLG00000018216
I
0.000
IRF8
Otolemur garnettii
ENSOGAG00000009262
I
0.000
IRF4
Otolemur garnettii
ENSOGAG00000014574
I
0.000
ENSOARG00000003822
Ovis aries
ENSOARG00000003822
I
0.000
ENSOARG00000011513
Ovis aries
ENSOARG00000011513
I
0.000
IRF8
Pan troglodytes
ENSPTRG00000008435
I
0.000
IRF4
Pan troglodytes
ENSPTRG00000017656
I
0.000
ENSPANG00000023389
Papio anubis
ENSPANG00000023389
I
0.000
ENSPANG00000024770
Papio anubis
ENSPANG00000024770
I
0.000
ENSPSIG00000003518
Pelodiscus sinensis
ENSPSIG00000003518
I
0.000
ENSPSIG00000011619
Pelodiscus sinensis
ENSPSIG00000011619
I
0.000
ENSPSIG00000011788
Pelodiscus sinensis
ENSPSIG00000011788
I
0.000
ENSPFOG00000000657
Poecilia formosa
ENSPFOG00000000657
I
0.000
ENSPFOG00000015506
Poecilia formosa
ENSPFOG00000015506
I
0.000
ENSPFOG00000017639
Poecilia formosa
ENSPFOG00000017639
I
0.000
Pvit_05673
Pogona vitticeps
Pvit_05673
I
0.000
Pvit_16863
Pogona vitticeps
Pvit_16863
I
0.000
ENSPPYG00000007620
Pongo abelii
ENSPPYG00000007620
I
0.000
ENSPPYG00000016161
Pongo abelii
ENSPPYG00000016161
I
0.000
IRF8
Procavia capensis
ENSPCAG00000004460
I
0.000
IRF8
Pteropus vampyrus
ENSPVAG00000003758
I
0.000
IRF4
Pteropus vampyrus
ENSPVAG00000005078
I
0.000
Irf8
Rattus norvegicus
ENSRNOG00000017869
I
0.000
Irf4
Rattus norvegicus
ENSRNOG00000061070
I
0.000
ENSSHAG00000006901
Sarcophilus harrisii
ENSSHAG00000006901
I
0.000
ENSSHAG00000012864
Sarcophilus harrisii
ENSSHAG00000012864
I
0.000
ENSSHAG00000015592
Sarcophilus harrisii
ENSSHAG00000015592
I
0.000
ENSSSCG00000023184
Sus scrofa
ENSSSCG00000023184
I
0.000
IRF4
Taeniopygia guttata
ENSTGUG00000002144
I
0.000
ENSTGUG00000006609
Taeniopygia guttata
ENSTGUG00000006609
I
0.000
irf4b
Takifugu rubripes
ENSTRUG00000002946
I
0.000
irf4a
Takifugu rubripes
ENSTRUG00000011568
I
0.000
irf8
Takifugu rubripes
ENSTRUG00000018213
I
0.000
ENSTSYG00000006495
Tarsius syrichta
ENSTSYG00000006495
I
0.000
ENSTNIG00000002469
Tetraodon nigroviridis
ENSTNIG00000002469
I
0.000
irf4a
Tetraodon nigroviridis
ENSTNIG00000005370
I
0.000
irf4b
Tetraodon nigroviridis
ENSTNIG00000008222
I
0.000
irf8
Tetraodon nigroviridis
ENSTNIG00000009283
I
0.000
IRF4
Tupaia belangeri
ENSTBEG00000012240
I
0.000
IRF8
Tupaia belangeri
ENSTBEG00000013828
I
0.000
IRF4
Tursiops truncatus
ENSTTRG00000001849
I
0.000
IRF8
Tursiops truncatus
ENSTTRG00000016024
I
0.000
Tal_R007108
Tyto alba
Tal_R007108
I
0.000
Tal_R010571
Tyto alba
Tal_R010571
I
0.000
irf8.L
Xenopus laevis
XB-GENE-985949
I
0.000
irf10
Xenopus tropicalis
XB-GENE-1033046
I
0.000
irf4
Xenopus tropicalis
XB-GENE-988321
I
0.000
XP_002934991
Xenopus tropicalis
XP_002934991
I
0.000
ENSXMAG00000003082
Xiphophorus maculatus
ENSXMAG00000003082
I
0.000
ENSXMAG00000006246
Xiphophorus maculatus
ENSXMAG00000006246
I
0.000
ENSXMAG00000017015
Xiphophorus maculatus
ENSXMAG00000017015
I
0.000