CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra005886
(
Brassica rapa
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Bra005886
T018792_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra005886.1-P
B3
49
156
FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNTIISNNAEEKGMLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKQLDPADVVFFQRQRSDSRRLFIGWRRRG
Links
Other
B3
family TFs
Other
Brassica rapa
TFs
213 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00010p00234800
Amborella trichopoda
AMTR_s00010p00234800
N
Bostr.25993s0368
Boechera stricta
Bostr.25993s0368
N
evm.TU.supercontig_151.12
Carica papaya
evm.TU.supercontig_151.12
N
Ca_10412
Cicer arietinum
Ca_10412
N
Cucsa.340350
Cucumis sativus
Cucsa.340350
N
Eucgr.F02687
Eucalyptus grandis
Eucgr.F02687
N
Lus10004614.g
Linum usitatissimum
Lus10004614.g
N
chr4.CM0042.1400.nc
Lotus japonicus
chr4.CM0042.1400.nc
N
cassava22183.valid.m1
Manihot esculenta
cassava22183.valid.m1
N
MTR_1g115415
Medicago truncatula
MTR_1g115415
N
Pm022294
Prunus mume
Pm022294
N
PRUPE_ppa005819mg
Prunus persica
PRUPE_ppa005819mg
N
SapurV1A.1095s0110
Salix purpurea
SapurV1A.1095s0110
N
Solyc11g017050.1
Solanum lycopersicum
Solyc11g017050.1
N
PGSC0003DMG400009215
Solanum tuberosum
PGSC0003DMG400009215
N
VIT_11s0016g02240
Vitis vinifera
VIT_11s0016g02240
N