fgenesh1_pg.sca_62_chr14_1_0000032 (Nectria haematococca)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 fgenesh1_pg.sca_62_chr14_1_0000032 T028098_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.sca_62_chr14_1_0000032 BED ZF 76 111

Links

Other BED ZF family TFs
Other Nectria haematococca TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FUS3 Arabidopsis lyrata fgenesh2_kg.5__447__AT3G26790.1 I
FUS3 Arabidopsis thaliana AT3G26790 D
Bostr.0556s0351 Boechera stricta Bostr.0556s0351 I
Bo00285s530 Brassica oleracea Bo00285s530 I
Bra032953 Brassica rapa Bra032953 I
Cagra.1841s0002 Capsella grandiflora Cagra.1841s0002 I
Carubv10019353m.g Capsella rubella Carubv10019353m.g I
Ca_05976 Cicer arietinum Ca_05976 I
Cla009252 Citrullus lanatus Cla009252 I
Ciclev10016085m.g Citrus clementina Ciclev10016085m.g I
orange1.1g041864m.g Citrus sinensis orange1.1g041864m.g I
Thhalv10005481m.g Eutrema salsugineum Thhalv10005481m.g I
GLYMA19G27336 Glycine max GLYMA19G27336 I
GLYMA16G05480 Glycine max GLYMA16G05480 I
Gorai.001G273500 Gossypium raimondii Gorai.001G273500 I
cassava11393.m1 Manihot esculenta cassava11393.m1 I
cassava14836.m1 Manihot esculenta cassava14836.m1 I
MTR_7g083700 Medicago truncatula MTR_7g083700 I
POPTR_0017s08820 Populus trichocarpa POPTR_0017s08820 I
POPTR_0001s32990 Populus trichocarpa POPTR_0001s32990 I
Pm016099 Prunus mume Pm016099 I
PRUPE_ppa021307mg Prunus persica PRUPE_ppa021307mg I
30131.m006860 Ricinus communis 30131.m006860 I
TCM_017321 Theobroma cacao TCM_017321 I