CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gw1.8.161.1
(
Phytophthora capsici
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
gw1.8.161.1
T028925_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.8.161.1
BED ZF
11
49
FYTVLEPGLYRCNICEQPRKQAQRTGYTNLISHLNSKHP
Links
Other
BED ZF
family TFs
Other
Phytophthora capsici
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG015369.1
Alligator sinensis
Alligator_sinensis_CCG015369.1
I
ENSAMXG00000012918
Astyanax mexicanus
ENSAMXG00000012918
I
BGLB005418
Biomphalaria glabrata
BGLB005418
I
fgenesh2_pg.scaffold_489000019
Branchiostoma floridae
fgenesh2_pg.scaffold_489000019
I
SAMD11
Canis familiaris
ENSCAFG00000019373
I
samd11
Danio rerio
ENSDARG00000077852
I
SAMD11
Dasypus novemcinctus
ENSDNOG00000041400
I
HelroG194341
Helobdella robusta
HelroG194341
I
ISCW014501
Ixodes scapularis
ISCW014501
I
ENSLACG00000017131
Latimeria chalumnae
ENSLACG00000017131
I
ENSLOCG00000007210
Lepisosteus oculatus
ENSLOCG00000007210
I
LotgiG229327
Lottia gigantea
LotgiG229327
I
Myotis_brandtii_SAMD11_10009655
Myotis brandtii
Myotis_brandtii_SAMD11_10009655
I
ENSOARG00000008099
Ovis aries
ENSOARG00000008099
I
SMAR002327
Strigamia maritima
SMAR002327
I
SMAR002818
Strigamia maritima
SMAR002818
I
SPU_022540
Strongylocentrotus purpuratus
SPU_022540
I
Q4RVQ8_TETNG
Tetraodon nigroviridis
Q4RVQ8_TETNG
D
XP_002936428
Xenopus tropicalis
XP_002936428
I