CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Hand2
(
Dipodomys ordii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSDORG00000007304
T033875_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAND2
M04150_2.00
Homo sapiens
MACACCTGBD
HVCAGGTGTK
SELEX
Yin et al.(2017)
HAND2_eDBD_HT-SELEX
0.914
1.000
HAND2
M04151_2.00
Homo sapiens
MACACCTGYD
HRCAGGTGTK
SELEX
Yin et al.(2017)
HAND2_eDBD_Methyl-HT-SELEX
0.914
1.000
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000006849
bHLH
48
100
RRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLM
Links
Other
bHLH
family TFs
Other
Dipodomys ordii
TFs
101 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_701105.1
Arabidopsis lyrata
scaffold_701105.1
I
ERF015
Arabidopsis thaliana
AT4G31060
D
Bostr.7867s0965
Boechera stricta
Bostr.7867s0965
I
Bo1g011650
Brassica oleracea
Bo1g011650
I
Bra010258
Brassica rapa
Bra010258
I
Cagra.0380s0018
Capsella grandiflora
Cagra.0380s0018
I
Carubv10006208m.g
Capsella rubella
Carubv10006208m.g
I
Thhalv10026328m.g
Eutrema salsugineum
Thhalv10026328m.g
I