MYF5 (Erinaceus europaeus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSEEUG00000011612 T034025_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Myf5
M09463_2.00 		Mus musculus
NRRCAGCTGY
RCAGCTGYYN		 Misc
Heinz et al.(2010)
GM-Myf5_GSE24852 		0.914 0.981
MYF5
M09821_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYF5_Q6 		0.914 0.981
MYOG
M04098_2.00 		Homo sapiens
BRACAGCTGWCR
YGWCAGCTGTYV		 SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_1 		0.842 0.788
MYOG
M04099_2.00 		Homo sapiens
NAACAGCTGTYN
NRACAGCTGTTN		 SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_2 		0.842 0.788
MYOG
M04102_2.00 		Homo sapiens
NRACARCTGWCR
YGWCAGYTGTYN		 SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_1 		0.842 0.788
MYOG
M04103_2.00 		Homo sapiens
NAACARYTGTYN
NRACARYTGTTN		 SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_2 		0.842 0.788
Myog
M08061_2.00 		Mus musculus
RRCAGCTGVNN
NNBCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0500.1 		0.842 0.788
MYOG
M08721_2.00 		Homo sapiens
BHVCAGCTGYYNB
VNRRCAGCTGBDV		 Misc
Kulakovskiy et al.(2013)
MYOG_HUMAN.H11MO.0.B 		0.842 0.788
Myog
M08755_2.00 		Mus musculus
BHVCAGCTGYYNB
VNRRCAGCTGBDV		 Misc
Kulakovskiy et al.(2013)
MYOG_MOUSE.H11MO.0.A 		0.842 0.788
Myog
M09469_2.00 		Mus musculus
RACAGCTG
CAGCTGTY		 Misc
Heinz et al.(2010)
C2C12-MyoG_GSE36024 		0.842 0.788
MYOG
M09829_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYOGENIN_Q6_01 		0.842 0.788
MYOG
M09830_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYOGENIN_Q6 		0.842 0.788
MYOG
M04100_2.00 		Homo sapiens
BRACAGCTGTCR
YGACAGCTGTYV		 SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_1 		0.842 0.788
MYOG
M04101_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_2 		0.842 0.788
MYOG
M04104_2.00 		Homo sapiens
BRACAGCTGTCR
YGACAGCTGTYV		 SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_1 		0.842 0.788
MYOG
M04105_2.00 		Homo sapiens
NAACAGCTGTYN
NRACAGCTGTTN		 SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_2 		0.842 0.788
Myf6
M00120_2.00 		Mus musculus
NCRNNTGNY
RNCANNYGN		 PBM
Badis et al.(2009)
Myf6_3824 		0.841 0.808
Myf6
M01742_2.00 		Mus musculus
RACAGHTGH
DCADCTGTY		 PBM
Weirauch et al.(2014)
pTH5099 		0.841 0.808
MYF6
M02780_2.00 		Homo sapiens
AACARCTGTY
RACAGYTGTT		 SELEX
Jolma et al.(2013)
MYF6_1 		0.841 0.808
MYF6
M04084_2.00 		Homo sapiens
BRHCASSTGWCR
YGWCASSTGDYV		 SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_1 		0.841 0.808
MYF6
M04085_2.00 		Homo sapiens
NRACASSTGWYV
BRWCASSTGTYN		 SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_2 		0.841 0.808
MYF6
M05831_2.00 		Homo sapiens
BRACAKNTGNY
RNCANMTGTYV		 SMiLE-seq
Isakova et al.(2017)
MYF6 		0.841 0.808
MYF6
M08717_2.00 		Homo sapiens
CASCTGC
GCAGSTG		 Misc
Kulakovskiy et al.(2013)
MYF6_HUMAN.H11MO.0.C 		0.841 0.808
Myf6
M08767_2.00 		Mus musculus
CASCTGC
GCAGSTG		 Misc
Kulakovskiy et al.(2013)
MYF6_MOUSE.H11MO.0.C 		0.841 0.808
MYF6
M09820_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MRF4_Q3 		0.841 0.808
MYF6
M04086_2.00 		Homo sapiens
BRHCASSTGWCR
YGWCASSTGDYV		 SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_1 		0.841 0.808
MYF6
M04087_2.00 		Homo sapiens
BAACASSTGWYV
BRWCASSTGTTV		 SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_2 		0.841 0.808
MYOD1
M04116_2.00 		Homo sapiens
BAACASSTGNYV
BRNCASSTGTTV		 SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_1 		0.840 0.923
MYOD1
M04117_2.00 		Homo sapiens
BRVCASMTGDCG
CGHCAKSTGBYV		 SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_2 		0.840 0.923
MYOD1
M04120_2.00 		Homo sapiens
NAACASSTGNYV
BRNCASSTGTTN		 SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_1 		0.840 0.923
MYOD1
M04121_2.00 		Homo sapiens
BRMCASCTGDCR
YGHCAGSTGKYV		 SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_2 		0.840 0.923
Myod1
M08060_2.00 		Mus musculus
NVNRRCAGSTGBN
NVCASCTGYYNBN		 ChIP-seq
Mathelier et al.(2014)
MA0499.1 		0.840 0.923
MYOD1
M08724_2.00 		Homo sapiens
NVNNRNRRCAGCTGN
NCAGCTGYYNYNNBN		 Misc
Kulakovskiy et al.(2013)
MYOD1_HUMAN.H11MO.0.A 		0.840 0.923
Myod1
M08745_2.00 		Mus musculus
NVNRRNRRCAGSTGB
VCASCTGYYNYYNBN		 Misc
Kulakovskiy et al.(2013)
MYOD1_MOUSE.H11MO.0.A 		0.840 0.923
MYOD1
M09838_2.00 		Homo sapiens
HRVCACCTGHBB
VVDCAGGTGBYD		 Transfac
Matys et al.(2006)
V$MYOD_01 		0.840 0.923
MYOD1
M09839_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYOD_Q6_02 		0.840 0.923
MYOD1
M09840_2.00 		Homo sapiens
NVCABCTGNY
RNCAGVTGBN		 Transfac
Matys et al.(2006)
V$MYOD_Q6 		0.840 0.923
MYOD1
M04118_2.00 		Homo sapiens
BAACANVTGTYV
BRACABNTGTTV		 SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_1 		0.840 0.923
MYOD1
M04119_2.00 		Homo sapiens
BRRCASSTGDCR
YGHCASSTGYYV		 SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_2 		0.840 0.923
MYOD1
M04122_2.00 		Homo sapiens
NAMCASSTGBYV
BRVCASSTGKTN		 SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_1 		0.840 0.923
MYOD1
M04123_2.00 		Homo sapiens
BRMCASVTGNCR
YGNCABSTGKYV		 SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_2 		0.840 0.923
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000010568 bHLH 84 135

Links

Other bHLH family TFs
Other Erinaceus europaeus TFs

289 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_31774 Aegilops tauschii F775_31774 I
F775_32183 Aegilops tauschii F775_32183 I
AMTR_s00077p00070990 Amborella trichopoda AMTR_s00077p00070990 I
Aquca_004_00525 Aquilegia coerulea Aquca_004_00525 I
Aquca_045_00222 Aquilegia coerulea Aquca_045_00222 I
AtbZIP52 Arabidopsis lyrata Al_scaffold_0001_623 I
fgenesh2_kg.4__2179__AT2G40620.1 Arabidopsis lyrata fgenesh2_kg.4__2179__AT2G40620.1 I
AtbZIP52 Arabidopsis thaliana AT1G06850 D
BZIP18 Arabidopsis thaliana AT2G40620 D
Bostr.25219s0275 Boechera stricta Bostr.25219s0275 I
Bostr.9345s0072 Boechera stricta Bostr.9345s0072 I
Bo4g012700 Brassica oleracea Bo4g012700 I
Bo4g190320 Brassica oleracea Bo4g190320 I
Bo8g007220 Brassica oleracea Bo8g007220 I
Bo8g114410 Brassica oleracea Bo8g114410 I
Bra004582 Brassica rapa Bra004582 I
Bra016980 Brassica rapa Bra016980 I
Bra030663 Brassica rapa Bra030663 I
Bra031541 Brassica rapa Bra031541 I
PK00315.1 Cannabis sativa PK00315.1 D
PK16335.1 Cannabis sativa PK16335.1 D
Cagra.1642s0027 Capsella grandiflora Cagra.1642s0027 I
Cagra.1671s0308 Capsella grandiflora Cagra.1671s0308 I
Carubv10009673m.g Capsella rubella Carubv10009673m.g I
Carubv10025182m.g Capsella rubella Carubv10025182m.g I
evm.TU.supercontig_19.62 Carica papaya evm.TU.supercontig_19.62 I
evm.TU.supercontig_2.298 Carica papaya evm.TU.supercontig_2.298 I
Ca_04108 Cicer arietinum Ca_04108 I
Ca_08929 Cicer arietinum Ca_08929 I
Ca_15657 Cicer arietinum Ca_15657 I
Cla007409 Citrullus lanatus Cla007409 I
Cla013626 Citrullus lanatus Cla013626 I
Ciclev10032076m.g Citrus clementina Ciclev10032076m.g I
orange1.1g020026m.g Citrus sinensis orange1.1g020026m.g I
Cucsa.118900 Cucumis sativus Cucsa.118900 I
Cucsa.143950 Cucumis sativus Cucsa.143950 I
Eucgr.G03135 Eucalyptus grandis Eucgr.G03135 I
Eucgr.J00119 Eucalyptus grandis Eucgr.J00119 I
Thhalv10008146m.g Eutrema salsugineum Thhalv10008146m.g I
Thhalv10016819m.g Eutrema salsugineum Thhalv10016819m.g I
gene21344-v1.0-hybrid Fragaria vesca gene21344-v1.0-hybrid I
gene28103-v1.0-hybrid Fragaria vesca gene28103-v1.0-hybrid I
GLYMA02G40270 Glycine max GLYMA02G40270 I
GLYMA11G30940 Glycine max GLYMA11G30940 I
GLYMA14G38460 Glycine max GLYMA14G38460 I
GLYMA18G05880 Glycine max GLYMA18G05880 I
Gorai.009G293600 Gossypium raimondii Gorai.009G293600 I
Gorai.010G218700 Gossypium raimondii Gorai.010G218700 I
Gorai.011G209200 Gossypium raimondii Gorai.011G209200 I
MLOC_44311 Hordeum vulgare MLOC_44311 I
MLOC_51623 Hordeum vulgare MLOC_51623 I
MLOC_60045 Hordeum vulgare MLOC_60045 I
LPERR03G14390 Leersia perrieri LPERR03G14390 I
LPERR07G23230 Leersia perrieri LPERR07G23230 I
Lus10008605.g Linum usitatissimum Lus10008605.g I
Lus10009907.g Linum usitatissimum Lus10009907.g I
Lus10012881.g Linum usitatissimum Lus10012881.g I
Lus10030531.g Linum usitatissimum Lus10030531.g I
Lus10042211.g Linum usitatissimum Lus10042211.g I
LjSGA_023972.1 Lotus japonicus LjSGA_023972.1 I
MDP0000129203 Malus domestica MDP0000129203 I
MDP0000210251 Malus domestica MDP0000210251 I
MDP0000247372 Malus domestica MDP0000247372 I
MDP0000297791 Malus domestica MDP0000297791 I
MDP0000305387 Malus domestica MDP0000305387 I
cassava43674.valid.m1 Manihot esculenta cassava43674.valid.m1 I
MTR_3g094020 Medicago truncatula MTR_3g094020 I
MTR_3g467120 Medicago truncatula MTR_3g467120 I
MTR_5g075390 Medicago truncatula MTR_5g075390 I
mgf007830m Mimulus guttatus mgf007830m I
GSMUA_Achr11G23650_001 Musa acuminata GSMUA_Achr11G23650_001 I
GSMUA_Achr2G18830_001 Musa acuminata GSMUA_Achr2G18830_001 I
GSMUA_Achr5G29650_001 Musa acuminata GSMUA_Achr5G29650_001 I
GSMUA_AchrUn_randomG14020_001 Musa acuminata GSMUA_AchrUn_randomG14020_001 I
OBART03G16510 Oryza barthii OBART03G16510 I
OBART07G26390 Oryza barthii OBART07G26390 I
OB03G26210 Oryza brachyantha OB03G26210 I
OB07G31840 Oryza brachyantha OB07G31840 I
ORGLA03G0157900 Oryza glaberrima ORGLA03G0157900 I
ORGLA07G0207300 Oryza glaberrima ORGLA07G0207300 I
OGLUM07G26420 Oryza glumaepatula OGLUM07G26420 I
BGIOSGA012577 Oryza indica BGIOSGA012577 I
BGIOSGA023710 Oryza indica BGIOSGA023710 I
OLONG_008214 Oryza longistaminata OLONG_008214 I
OLONG_019327 Oryza longistaminata OLONG_019327 I
OMERI03G14760 Oryza meridionalis OMERI03G14760 I
OMERI07G23010 Oryza meridionalis OMERI07G23010 I
ONIVA03G17500 Oryza nivara ONIVA03G17500 I
ONIVA07G26100 Oryza nivara ONIVA07G26100 I
OPUNC03G15960 Oryza punctata OPUNC03G15960 I
OPUNC07G24840 Oryza punctata OPUNC07G24840 I
ORUFI03G17050 Oryza rufipogon ORUFI03G17050 I
RF2B Oryza sativa OS03G0336200 I
Pavir.Bb03755 Panicum virgatum Pavir.Bb03755 I
Pavir.Ib01574 Panicum virgatum Pavir.Ib01574 I
Pavir.J07252 Panicum virgatum Pavir.J07252 I
PDK_20s1367981g001 Phoenix dactylifera PDK_20s1367981g001 I
PDK_20s1563121g001 Phoenix dactylifera PDK_20s1563121g001 I
POPTR_0013s09350 Populus trichocarpa POPTR_0013s09350 I
POPTR_0013s15280 Populus trichocarpa POPTR_0013s15280 I
POPTR_0019s15040 Populus trichocarpa POPTR_0019s15040 I
Pm000251 Prunus mume Pm000251 I
Pm019060 Prunus mume Pm019060 I
PRUPE_ppa006097mg Prunus persica PRUPE_ppa006097mg I
PRUPE_ppa007645mg Prunus persica PRUPE_ppa007645mg I
29729.m002363 Ricinus communis 29729.m002363 I
29804.m001495 Ricinus communis 29804.m001495 I
SapurV1A.0182s0020 Salix purpurea SapurV1A.0182s0020 I
SapurV1A.0215s0230 Salix purpurea SapurV1A.0215s0230 I
SapurV1A.3480s0020 Salix purpurea SapurV1A.3480s0020 I
SapurV1A.4004s0010 Salix purpurea SapurV1A.4004s0010 I
Si030224m.g Setaria italica Si030224m.g I
Si036380m.g Setaria italica Si036380m.g I
Solyc06g048630.2 Solanum lycopersicum Solyc06g048630.2 I
PGSC0003DMG400016651 Solanum tuberosum PGSC0003DMG400016651 I
PGSC0003DMG400027599 Solanum tuberosum PGSC0003DMG400027599 I
TCM_042286 Theobroma cacao TCM_042286 I
TCM_045524 Theobroma cacao TCM_045524 I
Traes_2AS_3B7BE6FDC Triticum aestivum Traes_2AS_3B7BE6FDC I
Traes_2BS_1B0F27580 Triticum aestivum Traes_2BS_1B0F27580 I
Traes_2DS_93EAEC654 Triticum aestivum Traes_2DS_93EAEC654 I
Traes_4AS_45B416B25 Triticum aestivum Traes_4AS_45B416B25 I
Traes_4BL_9422485B3 Triticum aestivum Traes_4BL_9422485B3 I
Traes_4DL_19DC0CA31 Triticum aestivum Traes_4DL_19DC0CA31 I
AtbZIP52 Vitis vinifera VIT_06s0004g08070 I
VIT_13s0067g02900 Vitis vinifera VIT_13s0067g02900 I
GRMZM2G062391 Zea mays GRMZM2G062391 I
GRMZM2G151295 Zea mays GRMZM2G151295 I