BHLHE40 (Pan troglodytes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSPTRG00000014571 T037045_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bhlhe40
M00119_2.00 		Mus musculus
DCACGTGMN
NKCACGTGH		 PBM
Badis et al.(2009)
Bhlhb2_1274 		0.914 1.000
Bhlhe40
M01738_2.00 		Mus musculus
NCACRNBN
NVNYGTGN		 PBM
Weirauch et al.(2014)
pTH4330 		0.914 1.000
BHLHE40
M02788_2.00 		Homo sapiens
NKCACGTGMH
DKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB2_1 		0.914 1.000
Bhlhe40
M02817_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_1 		0.914 1.000
Bhlhe40
M02818_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_2 		0.914 1.000
BHLHE40
M04126_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX 		0.914 1.000
BHLHE40
M07798_2.00 		Homo sapiens
DCACGTGMSN
NSKCACGTGH		 ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha 		0.914 1.000
BHLHE40
M08726_2.00 		Homo sapiens
DDCACGTGMS
SKCACGTGHH		 Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A 		0.914 1.000
Bhlhe40
M08761_2.00 		Mus musculus
DCACGTGMS
SKCACGTGH		 Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A 		0.914 1.000
BHLHE40
M09456_2.00 		Homo sapiens
DCACGTGMNN
NNKCACGTGH		 Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477 		0.914 1.000
BHLHE40
M09842_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BHLHE40_03 		0.914 1.000
BHLHE40
M09843_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q2 		0.914 1.000
BHLHE40
M09844_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q3 		0.914 1.000
BHLHE40
M09845_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STRA13_01 		0.914 1.000
BHLHE40
M04127_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX 		0.914 1.000
Bhlhe41
M01739_2.00 		Mus musculus
NMNCGTGMN
NKCACGNKN		 PBM
Weirauch et al.(2014)
pTH5060 		0.914 0.981
BHLHE41
M02782_2.00 		Homo sapiens
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB3_1 		0.914 0.981
BHLHE41
M02783_2.00 		Homo sapiens
RKCACGTGAY
RTCACGTGMY		 SELEX
Jolma et al.(2013)
BHLHE41_1 		0.914 0.981
BHLHE41
M04106_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX 		0.914 0.981
BHLHE41
M09833_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q2 		0.914 0.981
BHLHE41
M09834_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q3 		0.914 0.981
BHLHE41
M04107_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000051613 bHLH 54 108

Links

Other bHLH family TFs
Other Pan troglodytes TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00006p00259200 Amborella trichopoda AMTR_s00006p00259200 I 0.000
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.000
Bra017664 Brassica rapa Bra017664 N 0.000
PK07533.1 Cannabis sativa PK07533.1 I 0.000
PK01815.1 Cannabis sativa PK01815.1 N 0.000
evm.TU.supercontig_129.74 Carica papaya evm.TU.supercontig_129.74 I 0.000
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.000
Ca_09362 Cicer arietinum Ca_09362 I 0.000
Cla020641 Citrullus lanatus Cla020641 I 0.000
Cla016841 Citrullus lanatus Cla016841 I 0.000
Cla016748 Citrullus lanatus Cla016748 I 0.000
Cla005975 Citrullus lanatus Cla005975 I 0.000
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.000
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I 0.000
Ciclev10013334m.g Citrus clementina Ciclev10013334m.g I 0.000
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.000
orange1.1g042014m.g Citrus sinensis orange1.1g042014m.g I 0.000
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.000
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.000
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.000
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.000
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.000
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.000
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.000
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.000
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.000
GLYMA04G01210 Glycine max GLYMA04G01210 I 0.000
GLYMA06G01240 Glycine max GLYMA06G01240 I 0.000
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.000
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.000
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.000
Gorai.008G085200 Gossypium raimondii Gorai.008G085200 I 0.000
Gorai.008G065300 Gossypium raimondii Gorai.008G065300 I 0.000
Gorai.007G056900 Gossypium raimondii Gorai.007G056900 I 0.000
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.000
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.000
Lus10011722.g Linum usitatissimum Lus10011722.g I 0.000
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.000
Lus10019273.g Linum usitatissimum Lus10019273.g N 0.000
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.000
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.000
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I 0.000
MDP0000863909 Malus domestica MDP0000863909 I 0.000
MDP0000205823 Malus domestica MDP0000205823 I 0.000
MDP0000239026 Malus domestica MDP0000239026 I 0.000
MDP0000891899 Malus domestica MDP0000891899 I 0.000
MDP0000261154 Malus domestica MDP0000261154 N 0.000
MDP0000738631 Malus domestica MDP0000738631 I 0.000
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.000
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.000
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.000
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.000
MTR_7g029400 Medicago truncatula MTR_7g029400 I 0.000
MTR_8g015250 Medicago truncatula MTR_8g015250 I 0.000
mgf018581m Mimulus guttatus mgf018581m I 0.000
mgf017392m Mimulus guttatus mgf017392m I 0.000
mgf004063m Mimulus guttatus mgf004063m N 0.000
mgf003466m Mimulus guttatus mgf003466m I 0.000
GSMUA_Achr10G20720_001 Musa acuminata GSMUA_Achr10G20720_001 I 0.000
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.000
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.000
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.000
POPTR_0014s00790 Populus trichocarpa POPTR_0014s00790 N 0.000
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I 0.000
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.000
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I 0.000
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I 0.000
Pm002353 Prunus mume Pm002353 I 0.000
Pm015434 Prunus mume Pm015434 I 0.000
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.000
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.000
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.000
28976.m000155 Ricinus communis 28976.m000155 N 0.000
30131.m007078 Ricinus communis 30131.m007078 I 0.000
30138.m003866 Ricinus communis 30138.m003866 I 0.000
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I 0.000
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I 0.000
SapurV1A.0235s0220 Salix purpurea SapurV1A.0235s0220 N 0.000
SapurV1A.0396s0080 Salix purpurea SapurV1A.0396s0080 I 0.000
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I 0.000
SapurV1A.0608s0130 Salix purpurea SapurV1A.0608s0130 N 0.000
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I 0.000
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.000
TCM_000835 Theobroma cacao TCM_000835 I 0.000
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.000
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.000