olig2 (Tetraodon nigroviridis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTNIG00000000234 T037692_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OLIG2
M02812_2.00 		Homo sapiens
AMCATATGBY
RVCATATGKT		 SELEX
Jolma et al.(2013)
OLIG2_1 		0.870 0.945
OLIG2
M02813_2.00 		Homo sapiens
AMCATATGBY
RVCATATGKT		 SELEX
Jolma et al.(2013)
OLIG2_2 		0.870 0.945
OLIG2
M04223_2.00 		Homo sapiens
AACAKMTGTB
VACAKMTGTT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_HT-SELEX_1 		0.870 0.945
OLIG2
M04224_2.00 		Homo sapiens
AMCATATGKY
RMCATATGKT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_HT-SELEX_2 		0.870 0.945
OLIG2
M08742_2.00 		Homo sapiens
NDNVHNRVVRVCAGMTGK
MCAKCTGBYBBYNDBNHN		 Misc
Kulakovskiy et al.(2013)
OLIG2_HUMAN.H11MO.0.B 		0.870 0.945
Olig2
M08771_2.00 		Mus musculus
NDNVHNRVVRVCAGMTGK
MCAKCTGBYBBYNDBNHN		 Misc
Kulakovskiy et al.(2013)
OLIG2_MOUSE.H11MO.0.A 		0.870 0.945
Olig2
M09477_2.00 		Mus musculus
RVCAKMTGKH
DMCAKMTGBY		 Misc
Heinz et al.(2010)
Neuron-Olig2_GSE30882 		0.870 0.945
OLIG2
M04225_2.00 		Homo sapiens
AACAKMTGKB
VMCAKMTGTT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_Methyl-HT-SELEX_1 		0.870 0.945
OLIG2
M04226_2.00 		Homo sapiens
AMCATATGKT
AMCATATGKT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_Methyl-HT-SELEX_2 		0.870 0.945
Olig3
M01745_2.00 		Mus musculus
NWAHHATANNN
NNNTATDDTWN		 PBM
Weirauch et al.(2014)
pTH5164 		0.870 0.927
OLIG3
M02798_2.00 		Homo sapiens
AMCATATGBY
RVCATATGKT		 SELEX
Jolma et al.(2013)
OLIG3_1 		0.870 0.927
OLIG3
M04175_2.00 		Homo sapiens
RMCATATGSY
RSCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_FL_HT-SELEX 		0.870 0.927
OLIG3
M04171_2.00 		Homo sapiens
RMCATATGSY
RSCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_eDBD_HT-SELEX_1 		0.870 0.927
OLIG3
M04172_2.00 		Homo sapiens
AACAKMTGBT
AVCAKMTGTT		 SELEX
Yin et al.(2017)
OLIG3_eDBD_HT-SELEX_2 		0.870 0.927
OLIG3
M04176_2.00 		Homo sapiens
RMCATATGGY
RCCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_FL_Methyl-HT-SELEX 		0.870 0.927
OLIG3
M04173_2.00 		Homo sapiens
RMCATATGSY
RSCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_eDBD_Methyl-HT-SELEX_1 		0.870 0.927
OLIG3
M04174_2.00 		Homo sapiens
VACAKMTGKY
RMCAKMTGTB		 SELEX
Yin et al.(2017)
OLIG3_eDBD_Methyl-HT-SELEX_2 		0.870 0.927
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000001699 bHLH 81 135

Links

Other bHLH family TFs
Other Tetraodon nigroviridis TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_001_00822 Aquilegia coerulea Aquca_001_00822 I
HY5 Arabidopsis lyrata scaffold_601144.1 I
HYH Arabidopsis lyrata fgenesh2_kg.3__1938__AT3G17609.2 I
HY5 Arabidopsis thaliana AT5G11260 D
HYH Arabidopsis thaliana AT3G17609 D
Bostr.23997s0021 Boechera stricta Bostr.23997s0021 I
Bostr.19424s0909 Boechera stricta Bostr.19424s0909 I
BRADI1G36750 Brachypodium distachyon BRADI1G36750 I
BRADI3G07540 Brachypodium distachyon BRADI3G07540 I
Bo9g171430 Brassica oleracea Bo9g171430 I
Bo5g122830 Brassica oleracea Bo5g122830 I
Bo3g069000 Brassica oleracea Bo3g069000 I
Bo2g010330 Brassica oleracea Bo2g010330 I
Bra021258 Brassica rapa Bra021258 I
Bra022225 Brassica rapa Bra022225 I
Bra023317 Brassica rapa Bra023317 I
Bra008976 Brassica rapa Bra008976 I
Bra001671 Brassica rapa Bra001671 I
PK17235.1 Cannabis sativa PK17235.1 I
Cagra.4396s0065 Capsella grandiflora Cagra.4396s0065 I
Cagra.7526s0027 Capsella grandiflora Cagra.7526s0027 I
evm.TU.supercontig_115.9 Carica papaya evm.TU.supercontig_115.9 I
evm.TU.supercontig_146.5 Carica papaya evm.TU.supercontig_146.5 N
Ca_21380 Cicer arietinum Ca_21380 I
Ca_22618 Cicer arietinum Ca_22618 I
Cla022656 Citrullus lanatus Cla022656 I
Ciclev10009720m.g Citrus clementina Ciclev10009720m.g I
orange1.1g030957m.g Citrus sinensis orange1.1g030957m.g I
Cucsa.162360 Cucumis sativus Cucsa.162360 I
Cucsa.310450 Cucumis sativus Cucsa.310450 I
Eucgr.C02802 Eucalyptus grandis Eucgr.C02802 I
Thhalv10004860m.g Eutrema salsugineum Thhalv10004860m.g I
Thhalv10014851m.g Eutrema salsugineum Thhalv10014851m.g I
Thhalv10021704m.g Eutrema salsugineum Thhalv10021704m.g I
gene22776-v1.0-hybrid Fragaria vesca gene22776-v1.0-hybrid N
gene11666-v1.0-hybrid Fragaria vesca gene11666-v1.0-hybrid I
GLYMA03G18990 Glycine max GLYMA03G18990 I
GLYMA08G41450 Glycine max GLYMA08G41450 I
Q39895_SOYBN Glycine max Q39895_SOYBN D
GLYMA16G13570 Glycine max GLYMA16G13570 I
GLYMA18G14750 Glycine max GLYMA18G14750 I
Lus10002900.g Linum usitatissimum Lus10002900.g I
LjB12O06.40.nc Lotus japonicus LjB12O06.40.nc I
chr6.LjT14A08.90.nd Lotus japonicus chr6.LjT14A08.90.nd I
MDP0000834642 Malus domestica MDP0000834642 I
MDP0000586302 Malus domestica MDP0000586302 I
MDP0000279891 Malus domestica MDP0000279891 N
MDP0000264514 Malus domestica MDP0000264514 I
cassava328.valid.m1 Manihot esculenta cassava328.valid.m1 I
cassava8163.valid.m1 Manihot esculenta cassava8163.valid.m1 I
MTR_3g436010 Medicago truncatula MTR_3g436010 I
MTR_7g057160 Medicago truncatula MTR_7g057160 I
mgf012104m Mimulus guttatus mgf012104m I
mgf014305m Mimulus guttatus mgf014305m I
GSMUA_Achr10G27050_001 Musa acuminata GSMUA_Achr10G27050_001 I
GSMUA_Achr5G06060_001 Musa acuminata GSMUA_Achr5G06060_001 I
GSMUA_Achr7G09980_001 Musa acuminata GSMUA_Achr7G09980_001 I
GSMUA_Achr9G28570_001 Musa acuminata GSMUA_Achr9G28570_001 I
OB02G17160 Oryza brachyantha OB02G17160 I
ORGLA02G0074000 Oryza glaberrima ORGLA02G0074000 I
OGLUM02G07920 Oryza glumaepatula OGLUM02G07920 I
BGIOSGA006916 Oryza indica BGIOSGA006916 I
ONIVA02G09400 Oryza nivara ONIVA02G09400 I
OPUNC02G07060 Oryza punctata OPUNC02G07060 I
OS02G0203000 Oryza sativa OS02G0203000 I
POPTR_0006s26800 Populus trichocarpa POPTR_0006s26800 I
POPTR_0010s00680 Populus trichocarpa POPTR_0010s00680 I
POPTR_0018s01530 Populus trichocarpa POPTR_0018s01530 I
Pm007163 Prunus mume Pm007163 I
PRUPE_ppa011967mg Prunus persica PRUPE_ppa011967mg I
PRUPE_ppa012064mg Prunus persica PRUPE_ppa012064mg I
29848.m004650 Ricinus communis 29848.m004650 I
29889.m003420 Ricinus communis 29889.m003420 I
SapurV1A.0043s0530 Salix purpurea SapurV1A.0043s0530 I
SapurV1A.3812s0010 Salix purpurea SapurV1A.3812s0010 I
SapurV1A.2641s0040 Salix purpurea SapurV1A.2641s0040 I
SapurV1A.1258s0140 Salix purpurea SapurV1A.1258s0140 I
SapurV1A.0264s0450 Salix purpurea SapurV1A.0264s0450 I
SapurV1A.0073s0400 Salix purpurea SapurV1A.0073s0400 I
SELMODRAFT_451330 Selaginella moellendorffii SELMODRAFT_451330 I
SELMODRAFT_173274 Selaginella moellendorffii SELMODRAFT_173274 I
Solyc08g061130.2 Solanum lycopersicum Solyc08g061130.2 I
PGSC0003DMG401020784 Solanum tuberosum PGSC0003DMG401020784 I
Traes_6BS_993CBD840 Triticum aestivum Traes_6BS_993CBD840 I
HY5 Vitis vinifera VIT_04s0008g05210 I
HYH Vitis vinifera VIT_05s0020g01090 N