cassava32077.m1 (Manihot esculenta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 cassava32077.m1 T048036_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK20225.1
M01128_2.00 		Cannabis sativa
NCACGTGVN
NBCACGTGN		 PBM
Lambert et al.(2019)
pTH11274 		0.884 0.837
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava32077.m1 bHLH 33 81

Links

Other bHLH family TFs
Other Manihot esculenta TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00007p00170710 Amborella trichopoda AMTR_s00007p00170710 I 0.854
Aquca_081_00012 Aquilegia coerulea Aquca_081_00012 I 0.867
BHLH106 Arabidopsis thaliana AT2G41130 N 0.846
Bostr.9345s0019 Boechera stricta Bostr.9345s0019 N 0.846
BRADI1G67500 Brachypodium distachyon BRADI1G67500 I 0.842
BRADI2G03830 Brachypodium distachyon BRADI2G03830 I 0.839
BRADI2G07050 Brachypodium distachyon BRADI2G07050 N 0.867
Bo3g035410 Brassica oleracea Bo3g035410 N 0.846
Bo4g012960 Brassica oleracea Bo4g012960 N 0.846
Bo4g112750 Brassica oleracea Bo4g112750 N 0.843
Bo4g190700 Brassica oleracea Bo4g190700 N 0.846
Bra004599 Brassica rapa Bra004599 N 0.846
Bra014672 Brassica rapa Bra014672 N 0.843
Bra016951 Brassica rapa Bra016951 N 0.846
PK20225.1 Cannabis sativa PK20225.1 D 0.884
Cagra.0578s0007 Capsella grandiflora Cagra.0578s0007 N 0.846
Cagra.1642s0077 Capsella grandiflora Cagra.1642s0077 N 0.846
Carubv10017947m.g Capsella rubella Carubv10017947m.g N 0.846
Carubv10023903m.g Capsella rubella Carubv10023903m.g N 0.846
evm.TU.supercontig_7.53 Carica papaya evm.TU.supercontig_7.53 I 0.884
Ca_06386 Cicer arietinum Ca_06386 I 0.864
Cla019977 Citrullus lanatus Cla019977 I 0.870
Cla013743 Citrullus lanatus Cla013743 I 0.840
Ciclev10016289m.g Citrus clementina Ciclev10016289m.g I 0.884
orange1.1g024670m.g Citrus sinensis orange1.1g024670m.g I 0.884
Cucsa.213230 Cucumis sativus Cucsa.213230 I 0.870
Cucsa.200860 Cucumis sativus Cucsa.200860 I 0.840
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.883
Eucgr.D00509 Eucalyptus grandis Eucgr.D00509 I 0.842
Thhalv10006410m.g Eutrema salsugineum Thhalv10006410m.g N 0.846
Thhalv10017546m.g Eutrema salsugineum Thhalv10017546m.g N 0.846
gene29828-v1.0-hybrid Fragaria vesca gene29828-v1.0-hybrid I 0.888
GLYMA13G36741 Glycine max GLYMA13G36741 I 0.845
GLYMA02G15780 Glycine max GLYMA02G15780 I 0.864
GLYMA07G32690 Glycine max GLYMA07G32690 I 0.884
GLYMA12G33751 Glycine max GLYMA12G33751 I 0.845
Gorai.011G034000 Gossypium raimondii Gorai.011G034000 I 0.870
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I 0.912
MLOC_64390 Hordeum vulgare MLOC_64390 I 0.888
LPERR03G10060 Leersia perrieri LPERR03G10060 I 0.842
LPERR01G07000 Leersia perrieri LPERR01G07000 I 0.846
LPERR01G03590 Leersia perrieri LPERR01G03590 I 0.839
Lus10013917.g Linum usitatissimum Lus10013917.g I 0.882
Lus10001885.g Linum usitatissimum Lus10001885.g I 0.884
MDP0000249969 Malus domestica MDP0000249969 I 0.893
MDP0000256492 Malus domestica MDP0000256492 N 0.866
cassava18812.valid.m1 Manihot esculenta cassava18812.valid.m1 I 0.912
MTR_2g015890 Medicago truncatula MTR_2g015890 I 0.840
MTR_4g087920 Medicago truncatula MTR_4g087920 I 0.864
GSMUA_Achr1G21280_001 Musa acuminata GSMUA_Achr1G21280_001 I 0.842
GSMUA_Achr2G20040_001 Musa acuminata GSMUA_Achr2G20040_001 N 0.855
GSMUA_Achr3G03510_001 Musa acuminata GSMUA_Achr3G03510_001 N 0.846
OBART03G11320 Oryza barthii OBART03G11320 I 0.842
OB01G17480 Oryza brachyantha OB01G17480 I 0.876
OB03G21490 Oryza brachyantha OB03G21490 I 0.842
ORGLA03G0109100 Oryza glaberrima ORGLA03G0109100 I 0.842
ORGLA01G0065100 Oryza glaberrima ORGLA01G0065100 I 0.876
OGLUM01G08450 Oryza glumaepatula OGLUM01G08450 I 0.876
OGLUM03G11280 Oryza glumaepatula OGLUM03G11280 I 0.842
BGIOSGA003013 Oryza indica BGIOSGA003013 I 0.876
OLONG_004075 Oryza longistaminata OLONG_004075 I 0.842
OMERI01G07330 Oryza meridionalis OMERI01G07330 I 0.876
ONIVA01G09540 Oryza nivara ONIVA01G09540 I 0.876
ONIVA03G12280 Oryza nivara ONIVA03G12280 I 0.842
OPUNC01G07130 Oryza punctata OPUNC01G07130 I 0.876
ORUFI03G11650 Oryza rufipogon ORUFI03G11650 I 0.842
ORUFI01G08040 Oryza rufipogon ORUFI01G08040 I 0.876
OS03G0260600 Oryza sativa OS03G0260600 I 0.842
OS01G0218100 Oryza sativa OS01G0218100 I 0.876
Pavir.Ib01099 Panicum virgatum Pavir.Ib01099 I 0.842
Pavir.Eb00095 Panicum virgatum Pavir.Eb00095 I 0.888
Pavir.Ea00439 Panicum virgatum Pavir.Ea00439 I 0.839
Pavir.Ea00157 Panicum virgatum Pavir.Ea00157 I 0.888
Pavir.Ca01107 Panicum virgatum Pavir.Ca01107 I 0.839
PRUPE_ppa021837mg Prunus persica PRUPE_ppa021837mg N 0.866
29900.m001610 Ricinus communis 29900.m001610 I 0.890
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I 0.873
SapurV1A.0029s0640 Salix purpurea SapurV1A.0029s0640 N 0.866
SapurV1A.0189s0140 Salix purpurea SapurV1A.0189s0140 N 0.846
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I 0.873
Si002517m.g Setaria italica Si002517m.g I 0.875
Si002655m.g Setaria italica Si002655m.g I 0.839
Si039730m.g Setaria italica Si039730m.g I 0.842
Sb01g040450 Sorghum bicolor Sb01g040450 I 0.842
Sb03g001730 Sorghum bicolor Sb03g001730 I 0.888
TCM_029711 Theobroma cacao TCM_029711 I 0.912
TRAES3BF011300020CFD_g Triticum aestivum TRAES3BF011300020CFD_g I 0.888
Traes_5BL_CBFAD4B59 Triticum aestivum Traes_5BL_CBFAD4B59 N 0.846
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I 0.914
GRMZM2G166642 Zea mays GRMZM2G166642 I 0.888
GRMZM2G088443 Zea mays GRMZM2G088443 I 0.839
GRMZM2G043854 Zea mays GRMZM2G043854 I 0.842
GRMZM2G016039 Zea mays GRMZM2G016039 I 0.888