Cagra.2428s0003 (Capsella grandiflora)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cagra.2428s0003 T049285_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2428s0003.1.p bHLH 135 180

Links

Other bHLH family TFs
Other Capsella grandiflora TFs

325 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_10096 Aegilops tauschii F775_10096 I
AMTR_s00007p00170710 Amborella trichopoda AMTR_s00007p00170710 I
AMTR_s00002p00019320 Amborella trichopoda AMTR_s00002p00019320 I
Aquca_081_00012 Aquilegia coerulea Aquca_081_00012 I
Aquca_004_00748 Aquilegia coerulea Aquca_004_00748 I
scaffold_402920.1 Arabidopsis lyrata scaffold_402920.1 N
BHLH106 Arabidopsis thaliana AT2G41130 N
Bostr.9345s0019 Boechera stricta Bostr.9345s0019 N
Bostr.20505s0075 Boechera stricta Bostr.20505s0075 N
BRADI1G04280 Brachypodium distachyon BRADI1G04280 N
BRADI2G07050 Brachypodium distachyon BRADI2G07050 N
Bo4g012960 Brassica oleracea Bo4g012960 N
Bo3g035410 Brassica oleracea Bo3g035410 N
Bo4g190700 Brassica oleracea Bo4g190700 N
Bo4g112750 Brassica oleracea Bo4g112750 N
Bra016951 Brassica rapa Bra016951 N
Bra014672 Brassica rapa Bra014672 N
Bra004599 Brassica rapa Bra004599 N
PK23387.1 Cannabis sativa PK23387.1 N
Cagra.1642s0077 Capsella grandiflora Cagra.1642s0077 N
Cagra.0578s0007 Capsella grandiflora Cagra.0578s0007 N
Carubv10017947m.g Capsella rubella Carubv10017947m.g N
Carubv10023903m.g Capsella rubella Carubv10023903m.g N
evm.TU.supercontig_92.83 Carica papaya evm.TU.supercontig_92.83 N
Ca_07159 Cicer arietinum Ca_07159 N
Cla017413 Citrullus lanatus Cla017413 N
Cla019977 Citrullus lanatus Cla019977 I
Ciclev10012626m.g Citrus clementina Ciclev10012626m.g N
orange1.1g026479m.g Citrus sinensis orange1.1g026479m.g N
Cucsa.213230 Cucumis sativus Cucsa.213230 I
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I
Eucgr.A02230 Eucalyptus grandis Eucgr.A02230 N
Thhalv10006410m.g Eutrema salsugineum Thhalv10006410m.g N
Thhalv10017546m.g Eutrema salsugineum Thhalv10017546m.g N
gene14814-v1.0-hybrid Fragaria vesca gene14814-v1.0-hybrid N
GLYMA19G30910 Glycine max GLYMA19G30910 N
GLYMA03G28150 Glycine max GLYMA03G28150 N
GLYMA02G23590 Glycine max GLYMA02G23590 N
Gorai.007G352300 Gossypium raimondii Gorai.007G352300 N
MLOC_66385 Hordeum vulgare MLOC_66385 I
LPERR03G32730 Leersia perrieri LPERR03G32730 N
Lus10042017.g Linum usitatissimum Lus10042017.g N
Lus10018020.g Linum usitatissimum Lus10018020.g N
chr1.CM0816.330.nc Lotus japonicus chr1.CM0816.330.nc N
MDP0000138102 Malus domestica MDP0000138102 N
MDP0000213892 Malus domestica MDP0000213892 N
cassava7163.valid.m1 Manihot esculenta cassava7163.valid.m1 N
mgf009382m Mimulus guttatus mgf009382m N
GSMUA_Achr8G23980_001 Musa acuminata GSMUA_Achr8G23980_001 N
ORGLA03G0352000 Oryza glaberrima ORGLA03G0352000 N
OGLUM03G38250 Oryza glumaepatula OGLUM03G38250 N
OMERI03G35360 Oryza meridionalis OMERI03G35360 N
ONIVA03G40100 Oryza nivara ONIVA03G40100 N
OPUNC03G35590 Oryza punctata OPUNC03G35590 N
ORUFI03G40090 Oryza rufipogon ORUFI03G40090 N
OS03G0811400 Oryza sativa OS03G0811400 N
Pavir.J02699 Panicum virgatum Pavir.J02699 N
Pavir.J24868 Panicum virgatum Pavir.J24868 N
POPTR_0016s03460 Populus trichocarpa POPTR_0016s03460 N
POPTR_0006s03550 Populus trichocarpa POPTR_0006s03550 N
Pm025589 Prunus mume Pm025589 N
PRUPE_ppa011532mg Prunus persica PRUPE_ppa011532mg N
30180.m001071 Ricinus communis 30180.m001071 N
SapurV1A.0159s0020 Salix purpurea SapurV1A.0159s0020 N
SapurV1A.0189s0140 Salix purpurea SapurV1A.0189s0140 N
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I
Solyc10g078380.1 Solanum lycopersicum Solyc10g078380.1 N
PGSC0003DMG400008378 Solanum tuberosum PGSC0003DMG400008378 N
Sb01g003830 Sorghum bicolor Sb01g003830 N
TCM_024016 Theobroma cacao TCM_024016 N
Traes_4AS_DD16F89E7 Triticum aestivum Traes_4AS_DD16F89E7 I
Traes_4BL_A2B32FCEE Triticum aestivum Traes_4BL_A2B32FCEE I
Traes_4DL_7BD3165FB Triticum aestivum Traes_4DL_7BD3165FB I
Traes_5BL_CBFAD4B59 Triticum aestivum Traes_5BL_CBFAD4B59 N
TRIUR3_31897 Triticum urartu TRIUR3_31897 I
VIT_08s0040g01240 Vitis vinifera VIT_08s0040g01240 I
GRMZM2G027068 Zea mays GRMZM2G027068 N