CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.009G226200
(
Gossypium raimondii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Gorai.009G226200
T050072_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.009G226200.1
bHLH
170
218
PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILVDTIDYTKELL
Gorai.009G226200.2
bHLH
170
218
PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILVDTIDYTKELL
Links
Other
bHLH
family TFs
Other
Gossypium raimondii
TFs
152 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCL14
Arabidopsis thaliana
AT1G07530
N
0.000
Bostr.25219s0207
Boechera stricta
Bostr.25219s0207
N
0.000
Bo01118s010
Brassica oleracea
Bo01118s010
N
0.000
Bra030688
Brassica rapa
Bra030688
N
0.000
Cagra.1671s0373
Capsella grandiflora
Cagra.1671s0373
N
0.000
Carubv10008391m.g
Capsella rubella
Carubv10008391m.g
N
0.000
evm.TU.supercontig_81.126
Carica papaya
evm.TU.supercontig_81.126
N
0.000
evm.TU.supercontig_81.124
Carica papaya
evm.TU.supercontig_81.124
N
0.000
Ca_16678
Cicer arietinum
Ca_16678
N
0.000
Ciclev10027848m.g
Citrus clementina
Ciclev10027848m.g
N
0.000
orange1.1g046158m.g
Citrus sinensis
orange1.1g046158m.g
N
0.000
Eucgr.J02042
Eucalyptus grandis
Eucgr.J02042
N
0.000
Eucgr.B02350
Eucalyptus grandis
Eucgr.B02350
N
0.000
Thhalv10006868m.g
Eutrema salsugineum
Thhalv10006868m.g
N
0.000
gene34381-v1.0-hybrid
Fragaria vesca
gene34381-v1.0-hybrid
N
0.000
GLYMA11G14750
Glycine max
GLYMA11G14750
N
0.000
GLYMA12G06670
Glycine max
GLYMA12G06670
N
0.000
Gorai.003G130600
Gossypium raimondii
Gorai.003G130600
N
0.000
Gorai.001G111500
Gossypium raimondii
Gorai.001G111500
N
0.000
Lus10040790.g
Linum usitatissimum
Lus10040790.g
N
0.000
Lus10016521.g
Linum usitatissimum
Lus10016521.g
N
0.000
cassava19449.valid.m1
Manihot esculenta
cassava19449.valid.m1
N
0.000
cassava19450.valid.m1
Manihot esculenta
cassava19450.valid.m1
N
0.000
MTR_4g064160
Medicago truncatula
MTR_4g064160
N
0.000
POPTR_0009s03790
Populus trichocarpa
POPTR_0009s03790
N
0.000
POPTR_0001s24850
Populus trichocarpa
POPTR_0001s24850
N
0.000
Pm000719
Prunus mume
Pm000719
N
0.000
PRUPE_ppa002797mg
Prunus persica
PRUPE_ppa002797mg
N
0.000
PRUPE_ppa003149mg
Prunus persica
PRUPE_ppa003149mg
N
0.000
28650.m000191
Ricinus communis
28650.m000191
N
0.000
SapurV1A.0040s0470
Salix purpurea
SapurV1A.0040s0470
N
0.000
SapurV1A.4599s0010
Salix purpurea
SapurV1A.4599s0010
N
0.000
TCM_041814
Theobroma cacao
TCM_041814
N
0.000
TCM_041815
Theobroma cacao
TCM_041815
N
0.000
TCM_042705
Theobroma cacao
TCM_042705
N
0.000
VIT_06s0004g04960
Vitis vinifera
VIT_06s0004g04960
N
0.000
VIT_06s0004g04950
Vitis vinifera
VIT_06s0004g04950
N
0.000