Pavir.Eb01823 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Eb01823 T050759_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Eb01823.1.p bHLH 253 301

Links

Other bHLH family TFs
Other Panicum virgatum TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00021p00223240 Amborella trichopoda AMTR_s00021p00223240 I
fgenesh2_kg.1__103__AT1G01250.1 Arabidopsis lyrata fgenesh2_kg.1__103__AT1G01250.1 I
ERF023 Arabidopsis thaliana AT1G01250 D
Bostr.5325s0047 Boechera stricta Bostr.5325s0047 I
Bo5g002600 Brassica oleracea Bo5g002600 I
Bo8g117810 Brassica oleracea Bo8g117810 I
Bra032630 Brassica rapa Bra032630 I
Bra033274 Brassica rapa Bra033274 I
PK15554.1 Cannabis sativa PK15554.1 I
Cagra.1968s0069 Capsella grandiflora Cagra.1968s0069 I
Carubv10010347m.g Capsella rubella Carubv10010347m.g I
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I
Ca_01325 Cicer arietinum Ca_01325 I
Ca_17638 Cicer arietinum Ca_17638 I
Cla012665 Citrullus lanatus Cla012665 I
orange1.1g029627m.g Citrus sinensis orange1.1g029627m.g I
Cucsa.237150 Cucumis sativus Cucsa.237150 I
Thhalv10009402m.g Eutrema salsugineum Thhalv10009402m.g I
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I
gene19141-v1.0-hybrid Fragaria vesca gene19141-v1.0-hybrid I
GLYMA19G44580 Glycine max GLYMA19G44580 I
GLYMA16G02680 Glycine max GLYMA16G02680 I
GLYMA07G06080 Glycine max GLYMA07G06080 I
GLYMA03G41910 Glycine max GLYMA03G41910 I
Gorai.007G109400 Gossypium raimondii Gorai.007G109400 I
Gorai.008G126000 Gossypium raimondii Gorai.008G126000 I
chr1.LjT43L07.200.nd Lotus japonicus chr1.LjT43L07.200.nd I
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I
cassava43608.valid.m1 Manihot esculenta cassava43608.valid.m1 I
MTR_7g117690 Medicago truncatula MTR_7g117690 I
MTR_8g027465 Medicago truncatula MTR_8g027465 I
mgf020568m Mimulus guttatus mgf020568m I
POPTR_0855s00200 Populus trichocarpa POPTR_0855s00200 I
POPTR_0014s09540 Populus trichocarpa POPTR_0014s09540 I
POPTR_0002s17330 Populus trichocarpa POPTR_0002s17330 I
POPTR_0002s17320 Populus trichocarpa POPTR_0002s17320 I
Pm018354 Prunus mume Pm018354 I
PRUPE_ppa026139mg Prunus persica PRUPE_ppa026139mg I
29742.m001400 Ricinus communis 29742.m001400 I
SapurV1A.0003s1030 Salix purpurea SapurV1A.0003s1030 I
SapurV1A.0013s0250 Salix purpurea SapurV1A.0013s0250 I
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I
PGSC0003DMG400007036 Solanum tuberosum PGSC0003DMG400007036 N
TCM_036269 Theobroma cacao TCM_036269 I
TCM_005130 Theobroma cacao TCM_005130 I
VIT_15s0046g00310 Vitis vinifera VIT_15s0046g00310 I