TCM_005130 (Theobroma cacao)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 TCM_005130 T005574_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF023
M06560_2.00 		Arabidopsis thaliana
DYCACCGACANHDNN
NNHDNTGTCGGTGRH		 Dap-seq
OMalley et al.(2016)
AT1G01250_col_a 		0.821 0.960
ERF023
M06561_2.00 		Arabidopsis thaliana
HHNHHDHCACCGACA
TGTCGGTGDHDDNDD		 Dap-seq
OMalley et al.(2016)
AT1G01250_colamp_a 		0.821 0.960
estExt_fgenesh1_pg.C_4800009
M01639_2.00 		Physcomitrella patens
MACCGACM
KGTCGGTK		 PBM
Weirauch et al.(2014)
pTH8488 		0.683 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOX95683 AP2 40 91

Links

Other AP2 family TFs
Other Theobroma cacao TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.008G126000 Gossypium raimondii Gorai.008G126000 I 0.834
gene19141-v1.0-hybrid Fragaria vesca gene19141-v1.0-hybrid I 0.824
SapurV1A.0003s1030 Salix purpurea SapurV1A.0003s1030 I 0.824
PK15554.1 Cannabis sativa PK15554.1 I 0.824
chr1.LjT43L07.200.nd Lotus japonicus chr1.LjT43L07.200.nd I 0.824
ERF023 Arabidopsis thaliana AT1G01250 D 0.821
fgenesh2_kg.1__103__AT1G01250.1 Arabidopsis lyrata fgenesh2_kg.1__103__AT1G01250.1 I 0.821
Cagra.1968s0069 Capsella grandiflora Cagra.1968s0069 I 0.821
Carubv10010347m.g Capsella rubella Carubv10010347m.g I 0.821
PRUPE_ppa026139mg Prunus persica PRUPE_ppa026139mg I 0.820
Pm018354 Prunus mume Pm018354 I 0.820
Bra032630 Brassica rapa Bra032630 I 0.817
POPTR_0014s09540 Populus trichocarpa POPTR_0014s09540 I 0.816
29742.m001400 Ricinus communis 29742.m001400 I 0.816
MTR_7g117690 Medicago truncatula MTR_7g117690 I 0.815
Bostr.5325s0047 Boechera stricta Bostr.5325s0047 I 0.815
GLYMA19G44580 Glycine max GLYMA19G44580 I 0.814
Ciclev10022410m.g Citrus clementina Ciclev10022410m.g I 0.814
orange1.1g029627m.g Citrus sinensis orange1.1g029627m.g I 0.814
POPTR_0002s17320 Populus trichocarpa POPTR_0002s17320 I 0.811
POPTR_0002s17330 Populus trichocarpa POPTR_0002s17330 I 0.811
POPTR_0855s00200 Populus trichocarpa POPTR_0855s00200 I 0.811
SapurV1A.0013s0250 Salix purpurea SapurV1A.0013s0250 I 0.811
GLYMA03G41910 Glycine max GLYMA03G41910 I 0.805
Gorai.007G109400 Gossypium raimondii Gorai.007G109400 I 0.805
Bo5g002600 Brassica oleracea Bo5g002600 I 0.801
Bra033274 Brassica rapa Bra033274 I 0.801
Thhalv10009402m.g Eutrema salsugineum Thhalv10009402m.g I 0.801
GLYMA16G02680 Glycine max GLYMA16G02680 I 0.800
Bo8g117810 Brassica oleracea Bo8g117810 I 0.797
Ca_17638 Cicer arietinum Ca_17638 I 0.796
mgf020568m Mimulus guttatus mgf020568m I 0.795
Ca_01325 Cicer arietinum Ca_01325 I 0.794
GLYMA07G06080 Glycine max GLYMA07G06080 I 0.792
VIT_15s0046g00310 Vitis vinifera VIT_15s0046g00310 I 0.790
MTR_8g027465 Medicago truncatula MTR_8g027465 I 0.788
cassava43608.valid.m1 Manihot esculenta cassava43608.valid.m1 I 0.771
AMTR_s00021p00223240 Amborella trichopoda AMTR_s00021p00223240 I 0.762
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.696
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.695
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.684
Bra016136 Brassica rapa Bra016136 I 0.683
estExt_fgenesh1_pg.C_4800009 Physcomitrella patens estExt_fgenesh1_pg.C_4800009 D 0.683
TCM_036269 Theobroma cacao TCM_036269 I 0.678
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.678
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.677