CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Thhalv10006189m.g
(
Eutrema salsugineum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Thhalv10006189m.g
T051196_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10006189m
bHLH
73
125
KKLNHNASERDRRKKINSMFSSLRSCLPASDQSKKLSIPQTVSRSLKYIPELQ
Links
Other
bHLH
family TFs
Other
Eutrema salsugineum
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BHLH039
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001751
N
0.885
ORG2
Arabidopsis thaliana
AT3G56970
N
0.843
Bostr.20505s0055
Boechera stricta
Bostr.20505s0055
N
0.885
Bostr.20505s0056
Boechera stricta
Bostr.20505s0056
N
0.885
Bo01495s010
Brassica oleracea
Bo01495s010
N
0.911
Bo4g112570
Brassica oleracea
Bo4g112570
N
0.871
Bo4g112590
Brassica oleracea
Bo4g112590
N
0.911
Bo6g072500
Brassica oleracea
Bo6g072500
N
0.900
Bo6g072510
Brassica oleracea
Bo6g072510
N
0.899
Bo7g039170
Brassica oleracea
Bo7g039170
N
0.841
Bra014658
Brassica rapa
Bra014658
N
0.911
Bra014971
Brassica rapa
Bra014971
N
0.841
Bra014657
Brassica rapa
Bra014657
N
0.911
Bra014654
Brassica rapa
Bra014654
N
0.911
Bra003261
Brassica rapa
Bra003261
N
0.864
Bra003260
Brassica rapa
Bra003260
N
0.900
Cagra.0578s0028
Capsella grandiflora
Cagra.0578s0028
N
0.885
Cagra.0578s0027
Capsella grandiflora
Cagra.0578s0027
N
0.857
Carubv10019130m.g
Capsella rubella
Carubv10019130m.g
N
0.857
Carubv10017770m.g
Capsella rubella
Carubv10017770m.g
N
0.885
Cucsa.371810
Cucumis sativus
Cucsa.371810
N
0.843
Thhalv10006191m.g
Eutrema salsugineum
Thhalv10006191m.g
N
0.914
MDP0000641681
Malus domestica
MDP0000641681
N
0.852
POPTR_0016s03680
Populus trichocarpa
POPTR_0016s03680
N
0.847
POPTR_0006s03590
Populus trichocarpa
POPTR_0006s03590
N
0.845
POPTR_0006s03560
Populus trichocarpa
POPTR_0006s03560
N
0.845
Pm031098
Prunus mume
Pm031098
N
0.841
Pm028948
Prunus mume
Pm028948
N
0.850
27751.m000169
Ricinus communis
27751.m000169
N
0.851
SapurV1A.0159s0010
Salix purpurea
SapurV1A.0159s0010
N
0.847
SapurV1A.0196s0420
Salix purpurea
SapurV1A.0196s0420
N
0.845
SapurV1A.0196s0430
Salix purpurea
SapurV1A.0196s0430
N
0.847
VIT_08s0007g05300
Vitis vinifera
VIT_08s0007g05300
N
0.847