CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fosab
(
Gasterosteus aculeatus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSGACG00000010476
T059797_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOS
M04327_2.00
Homo sapiens
BRTGACGTCAYV
BRTGACGTCAYV
SELEX
Yin et al.(2017)
FOS_eDBD_HT-SELEX
0.892
0.873
FOS
M08069_2.00
Homo sapiens
DVTGASTCATN
NATGASTCABH
ChIP-seq
Mathelier et al.(2014)
MA0476.1
0.892
0.873
FOS
M07826_2.00
Homo sapiens
NATGASTCABDBN
NVHVTGASTCATN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CFOS_Stanford
0.892
0.873
FOS
M07827_2.00
Homo sapiens
MTGASTCAYHN
NDRTGASTCAK
ChIP-seq
Gerstein et al.(2012)
HUVEC_CFOS_UCD
0.892
0.873
FOS
M07828_2.00
Homo sapiens
BDRTGASTCAYNBHB
VDVNRTGASTCAYHV
ChIP-seq
Gerstein et al.(2012)
K562_CFOS_UChicago
0.892
0.873
FOS
M08802_2.00
Homo sapiens
VTGACTCAB
VTGAGTCAB
Misc
Kulakovskiy et al.(2013)
FOS_HUMAN.H11MO.0.A
0.892
0.873
Fos
M08819_2.00
Mus musculus
NRTGACTCAYNN
NNRTGAGTCAYN
Misc
Kulakovskiy et al.(2013)
FOS_MOUSE.H11MO.0.A
0.892
0.873
FOS
M09988_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CFOS_Q4
0.892
0.873
FOS
M09989_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CFOS_Q6
0.892
0.873
FOS
M09990_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOS_02
0.892
0.873
FOS
M09991_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOS_03
0.892
0.873
FOS
M04328_2.00
Homo sapiens
VATGACRTCAYM
KRTGAYGTCATB
SELEX
Yin et al.(2017)
FOS_eDBD_Methyl-HT-SELEX
0.892
0.873
FOSB
M04272_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
FOSB_eDBD_HT-SELEX
0.848
0.746
FOSB
M08795_2.00
Homo sapiens
VTGACTCAB
VTGAGTCAB
Misc
Kulakovskiy et al.(2013)
FOSB_HUMAN.H11MO.0.A
0.848
0.746
Fosb
M08814_2.00
Mus musculus
VTGACTCAB
VTGAGTCAB
Misc
Kulakovskiy et al.(2013)
FOSB_MOUSE.H11MO.0.A
0.848
0.746
FOSB
M04273_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
FOSB_eDBD_Methyl-HT-SELEX
0.848
0.746
Fosl2
M01809_2.00
Mus musculus
GATGACKH
DMGTCATC
PBM
Weirauch et al.(2014)
pTH5108
0.847
0.762
Fosl2
M08828_2.00
Mus musculus
NVTGACTCABN
NVTGAGTCABN
Misc
Kulakovskiy et al.(2013)
FOSL2_MOUSE.H11MO.0.A
0.847
0.762
Fosl2
M09494_2.00
Mus musculus
NNVTGASTCABN
NVTGASTCABNN
Misc
Heinz et al.(2010)
3T3L1-Fosl2_GSE56872
0.847
0.762
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000013845
bZIP
121
183
EEEEKKKIRRERNKQAAAKCRNRRRELTDTLQAETDELEDEKSLLQNDIANLLKEKERLEFIL
ENSGACP00000013848
bZIP
122
184
EEEEKKKIRRERNKQAAAKCRNRRRELTDTLQAETDELEDEKSLLQNDIANLLKEKERLEFIL
Links
Other
bZIP
family TFs
Other
Gasterosteus aculeatus
TFs
236 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_31139
Aegilops tauschii
F775_31139
I
AMTR_s00019p00235390
Amborella trichopoda
AMTR_s00019p00235390
I
AMTR_s00062p00211520
Amborella trichopoda
AMTR_s00062p00211520
I
Aquca_007_00971
Aquilegia coerulea
Aquca_007_00971
I
Aquca_033_00055
Aquilegia coerulea
Aquca_033_00055
I
SPL4
Arabidopsis lyrata
fgenesh2_kg.1__4389__AT1G53160.2
I
SPL1
Arabidopsis lyrata
fgenesh2_kg.4__2943__AT2G47070.1
I
SPL12
Arabidopsis lyrata
scaffold_503227.1
I
SPL4
Arabidopsis thaliana
AT1G53160
D
SPL12
Arabidopsis thaliana
AT3G60030
D
Bostr.0124s0106
Boechera stricta
Bostr.0124s0106
I
Bostr.23794s0714
Boechera stricta
Bostr.23794s0714
I
Bostr.25993s0059
Boechera stricta
Bostr.25993s0059
I
Bostr.28625s0189
Boechera stricta
Bostr.28625s0189
I
Bostr.29344s0010
Boechera stricta
Bostr.29344s0010
I
BRADI1G02760
Brachypodium distachyon
BRADI1G02760
I
BRADI1G26720
Brachypodium distachyon
BRADI1G26720
I
Bo4g005730
Brassica oleracea
Bo4g005730
I
Bo4g042390
Brassica oleracea
Bo4g042390
I
Bo5g127310
Brassica oleracea
Bo5g127310
I
Bo6g120690
Brassica oleracea
Bo6g120690
I
Bra005470
Brassica rapa
Bra005470
I
Bra015732
Brassica rapa
Bra015732
I
Bra027265
Brassica rapa
Bra027265
I
Bra038101
Brassica rapa
Bra038101
I
Bra041037
Brassica rapa
Bra041037
I
PK06791.1
Cannabis sativa
PK06791.1
D
PK22320.1
Cannabis sativa
PK22320.1
D
PK25661.1
Cannabis sativa
PK25661.1
I
Cagra.16630s0008
Capsella grandiflora
Cagra.16630s0008
I
Cagra.3527s0045
Capsella grandiflora
Cagra.3527s0045
I
Carubv10016658m.g
Capsella rubella
Carubv10016658m.g
I
evm.TU.supercontig_146.32
Carica papaya
evm.TU.supercontig_146.32
I
evm.TU.supercontig_36.105
Carica papaya
evm.TU.supercontig_36.105
I
evm.TU.supercontig_80.88
Carica papaya
evm.TU.supercontig_80.88
I
Ca_01036
Cicer arietinum
Ca_01036
I
Ca_03548
Cicer arietinum
Ca_03548
I
Ca_16243
Cicer arietinum
Ca_16243
I
Ca_18591
Cicer arietinum
Ca_18591
I
Ca_22526
Cicer arietinum
Ca_22526
I
Cla002263
Citrullus lanatus
Cla002263
I
Cla023735
Citrullus lanatus
Cla023735
I
Ciclev10000100m.g
Citrus clementina
Ciclev10000100m.g
I
Ciclev10004227m.g
Citrus clementina
Ciclev10004227m.g
I
Ciclev10009879m.g
Citrus clementina
Ciclev10009879m.g
I
Ciclev10016841m.g
Citrus clementina
Ciclev10016841m.g
I
Ciclev10018697m.g
Citrus clementina
Ciclev10018697m.g
I
orange1.1g001317m.g
Citrus sinensis
orange1.1g001317m.g
I
orange1.1g001971m.g
Citrus sinensis
orange1.1g001971m.g
I
orange1.1g029650m.g
Citrus sinensis
orange1.1g029650m.g
I
orange1.1g032937m.g
Citrus sinensis
orange1.1g032937m.g
I
Cucsa.196000
Cucumis sativus
Cucsa.196000
I
Eucgr.A01019
Eucalyptus grandis
Eucgr.A01019
I
Eucgr.E03260
Eucalyptus grandis
Eucgr.E03260
I
Eucgr.F03303
Eucalyptus grandis
Eucgr.F03303
I
Eucgr.H04114
Eucalyptus grandis
Eucgr.H04114
I
Eucgr.K01046
Eucalyptus grandis
Eucgr.K01046
I
Thhalv10001295m.g
Eutrema salsugineum
Thhalv10001295m.g
I
Thhalv10006656m.g
Eutrema salsugineum
Thhalv10006656m.g
I
Thhalv10011728m.g
Eutrema salsugineum
Thhalv10011728m.g
I
Thhalv10018054m.g
Eutrema salsugineum
Thhalv10018054m.g
I
Thhalv10018065m.g
Eutrema salsugineum
Thhalv10018065m.g
I
Thhalv10021617m.g
Eutrema salsugineum
Thhalv10021617m.g
I
gene00196-v1.0-hybrid
Fragaria vesca
gene00196-v1.0-hybrid
I
gene22889-v1.0-hybrid
Fragaria vesca
gene22889-v1.0-hybrid
I
gene29726-v1.0-hybrid
Fragaria vesca
gene29726-v1.0-hybrid
I
GLYMA02G01160
Glycine max
GLYMA02G01160
I
GLYMA06G36140
Glycine max
GLYMA06G36140
I
GLYMA07G36180
Glycine max
GLYMA07G36180
I
GLYMA09G09790
Glycine max
GLYMA09G09790
I
GLYMA10G01211
Glycine max
GLYMA10G01211
I
GLYMA12G27330
Glycine max
GLYMA12G27330
I
GLYMA13G35000
Glycine max
GLYMA13G35000
I
GLYMA15G21860
Glycine max
GLYMA15G21860
I
GLYMA17G04400
Glycine max
GLYMA17G04400
I
Gorai.002G112200
Gossypium raimondii
Gorai.002G112200
I
Gorai.005G071400
Gossypium raimondii
Gorai.005G071400
I
Gorai.008G135700
Gossypium raimondii
Gorai.008G135700
I
Gorai.011G029400
Gossypium raimondii
Gorai.011G029400
I
Gorai.013G169800
Gossypium raimondii
Gorai.013G169800
I
MLOC_13032
Hordeum vulgare
MLOC_13032
I
MLOC_4830
Hordeum vulgare
MLOC_4830
I
MLOC_6525
Hordeum vulgare
MLOC_6525
I
LPERR03G34030
Leersia perrieri
LPERR03G34030
I
Lus10004523.g
Linum usitatissimum
Lus10004523.g
I
Lus10010071.g
Linum usitatissimum
Lus10010071.g
I
chr1.CM0122.330.nc
Lotus japonicus
chr1.CM0122.330.nc
I
chr3.CM0160.520.nc
Lotus japonicus
chr3.CM0160.520.nc
I
chr3.CM0282.980.nc
Lotus japonicus
chr3.CM0282.980.nc
I
chr5.CM0158.110.nc
Lotus japonicus
chr5.CM0158.110.nc
I
MDP0000156994
Malus domestica
MDP0000156994
I
MDP0000158607
Malus domestica
MDP0000158607
I
MDP0000180408
Malus domestica
MDP0000180408
I
MDP0000861601
Malus domestica
MDP0000861601
I
MDP0000919693
Malus domestica
MDP0000919693
I
MDP0000919694
Malus domestica
MDP0000919694
I
cassava29736.valid.m1
Manihot esculenta
cassava29736.valid.m1
I
cassava31252.valid.m1
Manihot esculenta
cassava31252.valid.m1
I
cassava36085.valid.m1
Manihot esculenta
cassava36085.valid.m1
I
cassava37839.valid.m1
Manihot esculenta
cassava37839.valid.m1
I
MTR_1g086250
Medicago truncatula
MTR_1g086250
I
MTR_2g046550
Medicago truncatula
MTR_2g046550
I
MTR_2g078770
Medicago truncatula
MTR_2g078770
I
MTR_7g110320
Medicago truncatula
MTR_7g110320
I
MTR_8g463140
Medicago truncatula
MTR_8g463140
I
mgf001202m
Mimulus guttatus
mgf001202m
I
mgf009459m
Mimulus guttatus
mgf009459m
I
mgf025134m
Mimulus guttatus
mgf025134m
I
GSMUA_Achr1G08440_001
Musa acuminata
GSMUA_Achr1G08440_001
I
GSMUA_Achr2G01820_001
Musa acuminata
GSMUA_Achr2G01820_001
I
GSMUA_Achr3G24520_001
Musa acuminata
GSMUA_Achr3G24520_001
I
GSMUA_Achr5G27280_001
Musa acuminata
GSMUA_Achr5G27280_001
I
OBART03G39900
Oryza barthii
OBART03G39900
I
OB03G47050
Oryza brachyantha
OB03G47050
I
OB08G27190
Oryza brachyantha
OB08G27190
I
ORGLA03G0367800
Oryza glaberrima
ORGLA03G0367800
I
OGLUM03G39810
Oryza glumaepatula
OGLUM03G39810
I
OMERI03G36740
Oryza meridionalis
OMERI03G36740
I
ONIVA03G41820
Oryza nivara
ONIVA03G41820
I
OPUNC03G37130
Oryza punctata
OPUNC03G37130
I
OPUNC03G37170
Oryza punctata
OPUNC03G37170
I
ORUFI03G41710
Oryza rufipogon
ORUFI03G41710
I
SPL6
Oryza sativa
OS03G0833300
I
Pavir.Ia00235
Panicum virgatum
Pavir.Ia00235
I
Pavir.J01500
Panicum virgatum
Pavir.J01500
I
estExt_fgenesh1_pg.C_1940032
Physcomitrella patens
estExt_fgenesh1_pg.C_1940032
I
fgenesh1_pg.scaffold_118000004
Physcomitrella patens
fgenesh1_pg.scaffold_118000004
I
POPTR_0001s40870
Populus trichocarpa
POPTR_0001s40870
I
POPTR_0002s18970
Populus trichocarpa
POPTR_0002s18970
I
POPTR_0010s16370
Populus trichocarpa
POPTR_0010s16370
I
POPTR_0011s11770
Populus trichocarpa
POPTR_0011s11770
I
POPTR_0014s10960
Populus trichocarpa
POPTR_0014s10960
I
Pm011381
Prunus mume
Pm011381
I
Pm014154
Prunus mume
Pm014154
I
PRUPE_ppa000792mg
Prunus persica
PRUPE_ppa000792mg
I
PRUPE_ppa011968mg
Prunus persica
PRUPE_ppa011968mg
I
PRUPE_ppa022739mg
Prunus persica
PRUPE_ppa022739mg
I
PRUPE_ppa023657mg
Prunus persica
PRUPE_ppa023657mg
I
28211.m000132
Ricinus communis
28211.m000132
I
29889.m003388
Ricinus communis
29889.m003388
I
29983.m003158
Ricinus communis
29983.m003158
I
30076.m004574
Ricinus communis
30076.m004574
I
30170.m014245
Ricinus communis
30170.m014245
I
SapurV1A.0014s0380
Salix purpurea
SapurV1A.0014s0380
I
SapurV1A.0072s0370
Salix purpurea
SapurV1A.0072s0370
I
SapurV1A.0118s0110
Salix purpurea
SapurV1A.0118s0110
I
SapurV1A.0156s0200
Salix purpurea
SapurV1A.0156s0200
I
SapurV1A.0294s0270
Salix purpurea
SapurV1A.0294s0270
I
SapurV1A.1264s0060
Salix purpurea
SapurV1A.1264s0060
I
SapurV1A.3749s0010
Salix purpurea
SapurV1A.3749s0010
I
SELMODRAFT_17777
Selaginella moellendorffii
SELMODRAFT_17777
I
SELMODRAFT_437670
Selaginella moellendorffii
SELMODRAFT_437670
I
SELMODRAFT_445524
Selaginella moellendorffii
SELMODRAFT_445524
I
SELMODRAFT_7674
Selaginella moellendorffii
SELMODRAFT_7674
I
Si034095m.g
Setaria italica
Si034095m.g
I
Solyc01g068100.2
Solanum lycopersicum
Solyc01g068100.2
I
Solyc05g053240.2
Solanum lycopersicum
Solyc05g053240.2
I
Solyc07g053810.2
Solanum lycopersicum
Solyc07g053810.2
I
PGSC0003DMG400005196
Solanum tuberosum
PGSC0003DMG400005196
I
PGSC0003DMG400027151
Solanum tuberosum
PGSC0003DMG400027151
I
PGSC0003DMG400032817
Solanum tuberosum
PGSC0003DMG400032817
I
Sb01g002530
Sorghum bicolor
Sb01g002530
I
TCM_004922
Theobroma cacao
TCM_004922
I
TCM_008150
Theobroma cacao
TCM_008150
I
TCM_021482
Theobroma cacao
TCM_021482
I
TCM_029832
Theobroma cacao
TCM_029832
I
TCM_031595
Theobroma cacao
TCM_031595
I
Traes_2BS_186EA570A
Triticum aestivum
Traes_2BS_186EA570A
I
Traes_4AL_5062917C4
Triticum aestivum
Traes_4AL_5062917C4
I
Traes_5BL_3503725F1
Triticum aestivum
Traes_5BL_3503725F1
I
Traes_5DL_3CDCC5DFF
Triticum aestivum
Traes_5DL_3CDCC5DFF
I
TRIUR3_10193
Triticum urartu
TRIUR3_10193
I
TRIUR3_23102
Triticum urartu
TRIUR3_23102
I
TRIUR3_33729
Triticum urartu
TRIUR3_33729
I
VIT_05s0020g00700
Vitis vinifera
VIT_05s0020g00700
I
VIT_07s0005g02260
Vitis vinifera
VIT_07s0005g02260
I
VIT_12s0028g03350
Vitis vinifera
VIT_12s0028g03350
I
VIT_19s0014g02350
Vitis vinifera
VIT_19s0014g02350
I
GRMZM2G156756
Zea mays
GRMZM2G156756
I