SELMODRAFT_7674 (Selaginella moellendorffii)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 SELMODRAFT_7674 T323037_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
fgenesh1_pg.scaffold_252000020
M02481_2.00 		Physcomitrella patens
NNNKRCVNN
NNBGYMNNN		 PBM
Weirauch et al.(2014)
pTH8491 		0.963 0.865
fgenesh1_pg.scaffold_194000034
M02480_2.00 		Physcomitrella patens
NNNGTACNNN
NNNGTACNNN		 PBM
Weirauch et al.(2014)
pTH8580 		0.959 0.865
SPL8
M02714_2.00 		Arabidopsis thaliana
DWWDDDGTACRNWNHW
WDNWNYGTACHHHWWH		 SELEX
Mathelier et al.(2014)
MA0578.1 		0.925 0.865
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ06997 SBP 14 87

Links

Other SBP family TFs
Other Selaginella moellendorffii TFs

157 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SELMODRAFT_17777 Selaginella moellendorffii SELMODRAFT_17777 I 0.982
fgenesh1_pg.scaffold_118000004 Physcomitrella patens fgenesh1_pg.scaffold_118000004 I 0.979
SELMODRAFT_59884 Selaginella moellendorffii SELMODRAFT_59884 I 0.977
SELMODRAFT_28629 Selaginella moellendorffii SELMODRAFT_28629 I 0.977
fgenesh1_pg.scaffold_252000020 Physcomitrella patens fgenesh1_pg.scaffold_252000020 D 0.963
SELMODRAFT_49502 Selaginella moellendorffii SELMODRAFT_49502 I 0.962
SELMODRAFT_59543 Selaginella moellendorffii SELMODRAFT_59543 I 0.962
GSMUA_Achr7G08750_001 Musa acuminata GSMUA_Achr7G08750_001 I 0.960
fgenesh1_pg.scaffold_194000034 Physcomitrella patens fgenesh1_pg.scaffold_194000034 D 0.959
GSMUA_Achr7G05010_001 Musa acuminata GSMUA_Achr7G05010_001 I 0.950
fgenesh1_pg.scaffold_23000047 Physcomitrella patens fgenesh1_pg.scaffold_23000047 I 0.946
GSMUA_Achr10G06210_001 Musa acuminata GSMUA_Achr10G06210_001 I 0.946
GSMUA_Achr4G20590_001 Musa acuminata GSMUA_Achr4G20590_001 I 0.945
SELMODRAFT_17706 Selaginella moellendorffii SELMODRAFT_17706 I 0.945
SELMODRAFT_28630 Selaginella moellendorffii SELMODRAFT_28630 I 0.945
GSMUA_Achr3G00810_001 Musa acuminata GSMUA_Achr3G00810_001 I 0.941
BRADI1G31390 Brachypodium distachyon BRADI1G31390 I 0.940
GRMZM2G168229 Zea mays GRMZM2G168229 I 0.939
MLOC_326 Hordeum vulgare MLOC_326 I 0.939
LPERR06G19480 Leersia perrieri LPERR06G19480 I 0.939
Si006559m.g Setaria italica Si006559m.g I 0.939
Si017338m.g Setaria italica Si017338m.g I 0.939
ORGLA06G0196600 Oryza glaberrima ORGLA06G0196600 I 0.939
Sb10g026200 Sorghum bicolor Sb10g026200 I 0.939
Pavir.Da00293 Panicum virgatum Pavir.Da00293 I 0.939
SPL10 Oryza sativa OS06G0659100 I 0.939
ORUFI06G25170 Oryza rufipogon ORUFI06G25170 I 0.939
SPL10 Oryza indica BGIOSGA023408 I 0.939
OPUNC06G21190 Oryza punctata OPUNC06G21190 I 0.939
OMERI06G23430 Oryza meridionalis OMERI06G23430 I 0.939
ONIVA01G24470 Oryza nivara ONIVA01G24470 I 0.939
OB06G31100 Oryza brachyantha OB06G31100 I 0.939
Traes_7DL_ED348696E Triticum aestivum Traes_7DL_ED348696E I 0.939
OGLUM06G24700 Oryza glumaepatula OGLUM06G24700 I 0.939
Pavir.Db00525 Panicum virgatum Pavir.Db00525 I 0.939
Aquca_024_00116 Aquilegia coerulea Aquca_024_00116 I 0.938
GRMZM2G101499 Zea mays GRMZM2G101499 I 0.936
BGIOSGA007655 Oryza indica BGIOSGA007655 I 0.935
ORGLA02G0053800 Oryza glaberrima ORGLA02G0053800 I 0.935
SPL5 Oryza sativa OS02G0177300 I 0.935
OMERI02G06720 Oryza meridionalis OMERI02G06720 I 0.935
GSMUA_Achr4G24610_001 Musa acuminata GSMUA_Achr4G24610_001 I 0.934
GRMZM2G111136 Zea mays GRMZM2G111136 I 0.933
Sb04g005180 Sorghum bicolor Sb04g005180 I 0.933
MTR_8g005960 Medicago truncatula MTR_8g005960 I 0.933
BRADI3G05720 Brachypodium distachyon BRADI3G05720 I 0.933
LPERR02G05080 Leersia perrieri LPERR02G05080 I 0.932
OB02G15090 Oryza brachyantha OB02G15090 I 0.932
fgenesh1_pg.scaffold_50000085 Physcomitrella patens fgenesh1_pg.scaffold_50000085 I 0.932
Ciclev10021106m.g Citrus clementina Ciclev10021106m.g I 0.930
Gorai.001G176000 Gossypium raimondii Gorai.001G176000 I 0.930
orange1.1g020302m.g Citrus sinensis orange1.1g020302m.g I 0.930
Gorai.008G107400 Gossypium raimondii Gorai.008G107400 I 0.930
PGSC0003DMG400029162 Solanum tuberosum PGSC0003DMG400029162 I 0.930
evm.TU.supercontig_149.10 Carica papaya evm.TU.supercontig_149.10 I 0.930
Eucgr.E01600 Eucalyptus grandis Eucgr.E01600 I 0.930
POPTR_0014s05680 Populus trichocarpa POPTR_0014s05680 I 0.930
Solyc10g018780.1 Solanum lycopersicum Solyc10g018780.1 I 0.930
Solyc01g090730.2 Solanum lycopersicum Solyc01g090730.2 I 0.930
TCM_005622 Theobroma cacao TCM_005622 I 0.930
Ca_18942 Cicer arietinum Ca_18942 I 0.930
cassava19899.m1 Manihot esculenta cassava19899.m1 I 0.930
30174.m008803 Ricinus communis 30174.m008803 I 0.930
POPTR_0002s14320 Populus trichocarpa POPTR_0002s14320 I 0.930
PGSC0003DMG400026027 Solanum tuberosum PGSC0003DMG400026027 I 0.930
GLYMA07G14610 Glycine max GLYMA07G14610 I 0.930
GLYMA03G27180 Glycine max GLYMA03G27180 I 0.930
SapurV1A.0382s0100 Salix purpurea SapurV1A.0382s0100 I 0.930
PK25779.1 Cannabis sativa PK25779.1 I 0.930
Lus10028181.g Linum usitatissimum Lus10028181.g I 0.929
gene04786-v1.0-hybrid Fragaria vesca gene04786-v1.0-hybrid I 0.929
MLOC_51510 Hordeum vulgare MLOC_51510 I 0.929
GSMUA_Achr4G28960_001 Musa acuminata GSMUA_Achr4G28960_001 I 0.929
OPUNC02G05050 Oryza punctata OPUNC02G05050 I 0.929
fgenesh1_pg.scaffold_337000032 Physcomitrella patens fgenesh1_pg.scaffold_337000032 I 0.928
mgf016085m Mimulus guttatus mgf016085m I 0.928
MDP0000803116 Malus domestica MDP0000803116 I 0.928
SapurV1A.0033s0300 Salix purpurea SapurV1A.0033s0300 I 0.927
SPL8 Vitis vinifera VIT_15s0021g02300 I 0.927
Lus10042882.g Linum usitatissimum Lus10042882.g I 0.927
Cla006776 Citrullus lanatus Cla006776 I 0.927
AMTR_s00019p00235390 Amborella trichopoda AMTR_s00019p00235390 I 0.926
Thhalv10008083m.g Eutrema salsugineum Thhalv10008083m.g I 0.925
Bo5g001290 Brassica oleracea Bo5g001290 I 0.925
Carubv10009506m.g Capsella rubella Carubv10009506m.g I 0.925
Bra033221 Brassica rapa Bra033221 I 0.925
Bra032662 Brassica rapa Bra032662 I 0.925
SPL8 Arabidopsis thaliana AT1G02065 D 0.925
Cagra.1968s0141 Capsella grandiflora Cagra.1968s0141 I 0.925
SPL8 Arabidopsis lyrata fgenesh2_kg.1__23__AT1G02065.1 I 0.925
Bostr.5325s0127 Boechera stricta Bostr.5325s0127 I 0.925
Bo8g118210 Brassica oleracea Bo8g118210 I 0.925
GLYMA01G15258 Glycine max GLYMA01G15258 I 0.923
VIT_17s0000g01260 Vitis vinifera VIT_17s0000g01260 I 0.923
GSMUA_Achr2G11940_001 Musa acuminata GSMUA_Achr2G11940_001 I 0.921
BGIOSGA017275 Oryza indica BGIOSGA017275 I 0.917
Pavir.Gb00284 Panicum virgatum Pavir.Gb00284 I 0.917
BRADI5G24670 Brachypodium distachyon BRADI5G24670 I 0.917
Pavir.Ga00066 Panicum virgatum Pavir.Ga00066 I 0.917
ORGLA04G0242500 Oryza glaberrima ORGLA04G0242500 I 0.917
TRIUR3_34351 Triticum urartu TRIUR3_34351 I 0.917
OB04G34990 Oryza brachyantha OB04G34990 I 0.917
OLONG_021174 Oryza longistaminata OLONG_021174 I 0.917
MLOC_57503 Hordeum vulgare MLOC_57503 I 0.917
SPL8 Oryza sativa OS04G0656500 I 0.917
ONIVA04G26660 Oryza nivara ONIVA04G26660 I 0.917
Sb06g031290 Sorghum bicolor Sb06g031290 I 0.917
OBART04G27990 Oryza barthii OBART04G27990 I 0.917
OMERI04G23390 Oryza meridionalis OMERI04G23390 I 0.917
OGLUM04G27880 Oryza glumaepatula OGLUM04G27880 I 0.917
GRMZM2G036297 Zea mays GRMZM2G036297 I 0.917
LPERR04G23580 Leersia perrieri LPERR04G23580 I 0.917
ORUFI04G29620 Oryza rufipogon ORUFI04G29620 I 0.917
OPUNC04G25460 Oryza punctata OPUNC04G25460 I 0.917
Si022315m.g Setaria italica Si022315m.g I 0.917
GRMZM2G058588 Zea mays GRMZM2G058588 I 0.915
OBART06G23500 Oryza barthii OBART06G23500 I 0.915
Ca_05711 Cicer arietinum Ca_05711 I 0.914
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I 0.914
MTR_8g096780 Medicago truncatula MTR_8g096780 I 0.914
Traes_7DL_1957A97EC Triticum aestivum Traes_7DL_1957A97EC N 0.914
cassava17811.valid.m1 Manihot esculenta cassava17811.valid.m1 I 0.913
PK02140.1 Cannabis sativa PK02140.1 I 0.912
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I 0.911
gene06295-v1.0-hybrid Fragaria vesca gene06295-v1.0-hybrid I 0.910
POPTR_0015s11100 Populus trichocarpa POPTR_0015s11100 I 0.909
Cla020006 Citrullus lanatus Cla020006 I 0.908
Cla002666 Citrullus lanatus Cla002666 I 0.908
Pm024528 Prunus mume Pm024528 I 0.908
Cucsa.392170 Cucumis sativus Cucsa.392170 I 0.908
PRUPE_ppa006611mg Prunus persica PRUPE_ppa006611mg I 0.908
POPTR_0012s10260 Populus trichocarpa POPTR_0012s10260 I 0.908
Cucsa.126820 Cucumis sativus Cucsa.126820 I 0.907
SapurV1A.1018s0120 Salix purpurea SapurV1A.1018s0120 I 0.905
Cucsa.157230 Cucumis sativus Cucsa.157230 I 0.904
Pavir.Ab00520 Panicum virgatum Pavir.Ab00520 I 0.903
SapurV1A.0168s0440 Salix purpurea SapurV1A.0168s0440 I 0.902
Gorai.001G057700 Gossypium raimondii Gorai.001G057700 I 0.902
MTR_3g099080 Medicago truncatula MTR_3g099080 I 0.901
GLYMA06G17700 Glycine max GLYMA06G17700 I 0.901
GLYMA04G37391 Glycine max GLYMA04G37391 I 0.901
Ca_01426 Cicer arietinum Ca_01426 I 0.901
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.898
gene22888-v1.0-hybrid Fragaria vesca gene22888-v1.0-hybrid I 0.897
PRUPE_ppa008560mg Prunus persica PRUPE_ppa008560mg I 0.896
Pm017777 Prunus mume Pm017777 I 0.896
GLYMA12G35460 Glycine max GLYMA12G35460 I 0.894
GLYMA13G35000 Glycine max GLYMA13G35000 I 0.894
Bra039656 Brassica rapa Bra039656 I 0.893
Bo6g031220 Brassica oleracea Bo6g031220 I 0.893
MLOC_6525 Hordeum vulgare MLOC_6525 I 0.893
TRIUR3_10193 Triticum urartu TRIUR3_10193 I 0.893
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I 0.893
Cucsa.120620 Cucumis sativus Cucsa.120620 I 0.891
Cla019579 Citrullus lanatus Cla019579 I 0.888
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I 0.888
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I 0.886